Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F20
(188 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 22 0.77
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 1.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 1.8
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 19 5.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 18 9.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 18 9.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 18 9.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 18 9.5
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 18 9.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 18 9.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 18 9.5
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.8 bits (44), Expect = 0.77
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 113 EHLRFSLPRQGAGEHTGRRRGHRAVTAHRPQRHR 12
E+L+FS PR A + +T H + R
Sbjct: 105 EYLKFSYPRMRAPSFICENETRQGLTLHYRSKRR 138
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 1.0
Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -3
Query: 171 GASGA-HHHLSSLPSTGTLQRAPPLLAPTAGSRRAHRPPPR 52
G GA + H S S G P +GS PPPR
Sbjct: 1825 GQYGAPYDHYGSRGSVGRRSVGSARNIPVSGSPEPPPPPPR 1865
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 1.8
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -3
Query: 144 SSLPSTGTLQRAP-PLLAPTAGSRRAHRPPPRTPCGNRAPPSTPP 13
S PS+G P P +P A R + P + P PP PP
Sbjct: 13 SQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPG-GPPGAPP 56
Score = 19.0 bits (37), Expect = 5.4
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -3
Query: 54 RTPCGNRAPPS 22
R+P G + PPS
Sbjct: 402 RSPAGGQLPPS 412
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 19.0 bits (37), Expect = 5.4
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 108 PPLLAPTAGSRRAHRPPPRTPCGN 37
P LA T+ + A PP P G+
Sbjct: 38 PEHLAGTSTTAAATPTPPSVPVGS 61
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/17 (29%), Positives = 8/17 (47%)
Frame = +1
Query: 70 CSPAPCRGSEKRRCSLQ 120
C P PC + C+ +
Sbjct: 430 CGPNPCTHTTTNGCTAE 446
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/17 (29%), Positives = 8/17 (47%)
Frame = +1
Query: 70 CSPAPCRGSEKRRCSLQ 120
C P PC + C+ +
Sbjct: 416 CGPNPCTHTTTNGCTAE 432
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/17 (29%), Positives = 8/17 (47%)
Frame = +1
Query: 70 CSPAPCRGSEKRRCSLQ 120
C P PC + C+ +
Sbjct: 450 CGPNPCTHTTTNGCTAE 466
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 18.2 bits (35), Expect = 9.5
Identities = 5/17 (29%), Positives = 8/17 (47%)
Frame = +1
Query: 70 CSPAPCRGSEKRRCSLQ 120
C P PC + C+ +
Sbjct: 399 CGPNPCTHTTTNGCTAE 415
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 18.2 bits (35), Expect = 9.5
Identities = 6/21 (28%), Positives = 11/21 (52%)
Frame = -1
Query: 188 LSNLCRVQAEPTTISHRCRVP 126
L + CR+ P T + ++P
Sbjct: 438 LGSACRIHGSPATTAAPPQLP 458
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 18.2 bits (35), Expect = 9.5
Identities = 3/4 (75%), Positives = 4/4 (100%)
Frame = +2
Query: 146 RWWW 157
+WWW
Sbjct: 365 KWWW 368
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 18.2 bits (35), Expect = 9.5
Identities = 10/35 (28%), Positives = 17/35 (48%)
Frame = +3
Query: 72 LAGSLPWEREAEVLAAVYRYSAAMRDGGGLRLHPA 176
L G W++ + L + R S ++ RL+PA
Sbjct: 40 LMGRRRWKQYQDTLYSGTRSSESLTAQAHHRLYPA 74
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,564
Number of Sequences: 438
Number of extensions: 1228
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 42
effective length of database: 127,947
effective search space used: 2558940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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