Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F19
         (367 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   2.7  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    22   8.3  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    22   8.3  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    22   8.3  

>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 361 WCTRALKEPLKSRRWIQHSLL 299
           WCT  L +  KSR   +H LL
Sbjct: 51  WCTDELYDMRKSRCMTKHELL 71


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 48  YCILWRQDFSV 80
           YCILWR   SV
Sbjct: 423 YCILWRSWLSV 433


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 48  YCILWRQDFSV 80
           YCILWR   SV
Sbjct: 423 YCILWRSWLSV 433


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 48  YCILWRQDFSV 80
           YCILWR   SV
Sbjct: 401 YCILWRSWLSV 411


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 333,500
Number of Sequences: 2352
Number of extensions: 6291
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27514560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)