Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F18
         (331 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   2.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   5.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   5.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    20   5.8  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    20   5.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   5.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   7.7  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   7.7  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 145 GRGTSYNVHSYGPLKLCSNVCRFLTL 68
           G G  YN+ S   LKL  N+   + L
Sbjct: 180 GLGKQYNIASSKTLKLSINIISLVQL 205


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 59  SKSNTQCTDTDIIKNTH 9
           SK+N QC D    K T+
Sbjct: 303 SKNNDQCLDLSKTKETN 319


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 59  SKSNTQCTDTDIIKNTH 9
           SK+N QC D    K T+
Sbjct: 195 SKNNDQCLDLSKTKETN 211


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 3   KGVCIFYDISIC 38
           + VC FY+I +C
Sbjct: 242 QAVCTFYNILLC 253


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 3   KGVCIFYDISIC 38
           + VC FY+I +C
Sbjct: 242 QAVCTFYNILLC 253


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 5.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 3   KGVCIFYDISIC 38
           + VC FY+I +C
Sbjct: 562 QAVCTFYNILLC 573


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 12  CIFYDISICTLG 47
           CI YD+S+  LG
Sbjct: 558 CIRYDVSLSGLG 569


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = +1

Query: 277 HCISPTVPRLALTSLSC 327
           + +SP  P  ++ S+SC
Sbjct: 18  NAMSPMTPTYSMNSMSC 34


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,063
Number of Sequences: 336
Number of extensions: 1777
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6367260
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)