Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F18
         (331 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M95767-1|AAA35684.1|  385|Homo sapiens di-N-acetylchitobiase pro...    29   4.6  
BC126335-1|AAI26336.1|  385|Homo sapiens chitobiase, di-N-acetyl...    29   4.6  
BC126333-1|AAI26334.1|  385|Homo sapiens chitobiase, di-N-acetyl...    29   4.6  
AL359762-6|CAH70207.1|  385|Homo sapiens chitobiase, di-N-acetyl...    29   4.6  
AL359762-5|CAH70206.1|  294|Homo sapiens chitobiase, di-N-acetyl...    29   4.6  
AF085706-1|AAC35852.1|  385|Homo sapiens lysosomal di-N-acetylch...    29   4.6  
BC146824-1|AAI46825.1|  788|Homo sapiens Unknown (protein for IM...    28   6.0  
AK124835-1|BAC85963.1|  604|Homo sapiens protein ( Homo sapiens ...    28   6.0  
AF521131-1|AAM80488.1|  354|Homo sapiens platelet receptor for t...    28   8.0  

>M95767-1|AAA35684.1|  385|Homo sapiens di-N-acetylchitobiase
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 153 CKAAAAHPIMYTLTGHLNYVQMSVD 79
           C AAA  P   TLTG+ +Y++MS++
Sbjct: 219 CIAAANAPYNQTLTGYNDYIKMSIN 243


>BC126335-1|AAI26336.1|  385|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 153 CKAAAAHPIMYTLTGHLNYVQMSVD 79
           C AAA  P   TLTG+ +Y++MS++
Sbjct: 219 CIAAANAPYNQTLTGYNDYIKMSIN 243


>BC126333-1|AAI26334.1|  385|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 153 CKAAAAHPIMYTLTGHLNYVQMSVD 79
           C AAA  P   TLTG+ +Y++MS++
Sbjct: 219 CIAAANAPYNQTLTGYNDYIKMSIN 243


>AL359762-6|CAH70207.1|  385|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 153 CKAAAAHPIMYTLTGHLNYVQMSVD 79
           C AAA  P   TLTG+ +Y++MS++
Sbjct: 219 CIAAANAPYNQTLTGYNDYIKMSIN 243


>AL359762-5|CAH70206.1|  294|Homo sapiens chitobiase, di-N-acetyl-
           protein.
          Length = 294

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 153 CKAAAAHPIMYTLTGHLNYVQMSVD 79
           C AAA  P   TLTG+ +Y++MS++
Sbjct: 128 CIAAANAPYNQTLTGYNDYIKMSIN 152


>AF085706-1|AAC35852.1|  385|Homo sapiens lysosomal
           di-N-acetylchitobiase precursor protein.
          Length = 385

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -2

Query: 153 CKAAAAHPIMYTLTGHLNYVQMSVD 79
           C AAA  P   TLTG+ +Y++MS++
Sbjct: 219 CIAAANAPYNQTLTGYNDYIKMSIN 243


>BC146824-1|AAI46825.1|  788|Homo sapiens Unknown (protein for
           IMAGE:8860452) protein.
          Length = 788

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 219 TCLHFKIGSVAWARRALSLSLYFAHC 296
           T LH K G++ W   AL    YF HC
Sbjct: 451 TPLHHKQGALYWEPEALYTLCYFMHC 476


>AK124835-1|BAC85963.1|  604|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42845 fis, clone BRHIP2003786, moderately
           similar to CCA3. ).
          Length = 604

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 219 TCLHFKIGSVAWARRALSLSLYFAHC 296
           T LH K G++ W   AL    YF HC
Sbjct: 48  TPLHHKQGALYWEPEALYTLCYFMHC 73


>AF521131-1|AAM80488.1|  354|Homo sapiens platelet receptor for type
           III collagen protein.
          Length = 354

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = -2

Query: 177 YRDSSRTLCKAAAAHPIMYTLTGHLNYVQMSVDF*HLNWLQIEY 46
           YR+  R    A     I+Y     LN+V M  +F H N+L +EY
Sbjct: 304 YRNRYRIYDTACGTFVIIY-----LNFVNMHPNFTHTNYLNVEY 342


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,626,944
Number of Sequences: 237096
Number of extensions: 956531
Number of successful extensions: 1421
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1421
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)