Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F18
         (331 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH0241...    27   4.3  
AE014297-1252|AAF54600.2|  621|Drosophila melanogaster CG31299-P...    27   4.3  
AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB...    27   4.3  
AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA...    27   4.3  
AE014134-2661|AAN10925.1|   98|Drosophila melanogaster CG31736-P...    27   7.5  

>AF145601-1|AAD38576.1| 1080|Drosophila melanogaster BcDNA.GH02419
           protein.
          Length = 1080

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 147 LYKVSGMSRDNVRTRYFHYVYDMSTCLHFKIGS--VAWARRALSLSLY 284
           L +++  S+DNV+     YV++  TC    I S  V+ A    +L+LY
Sbjct: 460 LNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSEANDRFALTLY 507


>AE014297-1252|AAF54600.2|  621|Drosophila melanogaster CG31299-PA,
           isoform A protein.
          Length = 621

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 197 EISCSNVIATHPGHFVKR 144
           EI CSN + T PGH + R
Sbjct: 93  EIPCSNCLKTAPGHLIDR 110


>AE014134-1896|AAN10754.1| 1080|Drosophila melanogaster CG6206-PB,
           isoform B protein.
          Length = 1080

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 147 LYKVSGMSRDNVRTRYFHYVYDMSTCLHFKIGS--VAWARRALSLSLY 284
           L +++  S+DNV+     YV++  TC    I S  V+ A    +L+LY
Sbjct: 460 LNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSEANDRFALTLY 507


>AE014134-1895|AAF52958.2| 1080|Drosophila melanogaster CG6206-PA,
           isoform A protein.
          Length = 1080

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = +3

Query: 147 LYKVSGMSRDNVRTRYFHYVYDMSTCLHFKIGS--VAWARRALSLSLY 284
           L +++  S+DNV+     YV++  TC    I S  V+ A    +L+LY
Sbjct: 460 LNQLTVQSKDNVKDTSAKYVFEFKTCALLNITSCPVSEANDRFALTLY 507


>AE014134-2661|AAN10925.1|   98|Drosophila melanogaster CG31736-PA
           protein.
          Length = 98

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = -1

Query: 115 YGPLKLCSNVCRFLTLELAPNRIPSVQILIS 23
           YGPL LC   CR +   + P+ + S++I +S
Sbjct: 67  YGPLLLCVRACRLVF--VIPDGMSSIKIYLS 95


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,541,562
Number of Sequences: 53049
Number of extensions: 304435
Number of successful extensions: 765
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)