Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F18
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.9  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   5.1  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   5.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   5.1  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   5.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   8.9  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 139  GTSYNVHSYGPLKLCSNV 86
            G   N+H Y PLK+  +V
Sbjct: 994  GIDSNLHVYAPLKISLDV 1011



 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -2

Query: 291 GRNTVKARALDVPT 250
           G N VK  ++ VPT
Sbjct: 146 GENAVKVNSVQVPT 159


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 145 GRGTSYNVHSYGPLKL 98
           G G S NV  YG L L
Sbjct: 367 GNGDSVNVQLYGQLDL 382


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = -2

Query: 246 RCLS*NVNKCSYRIHNGNIVF 184
           R  + ++ KCSY + +  ++F
Sbjct: 181 RATNRDIKKCSYNMDSSYVIF 201


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 145 GRGTSYNVHSYGPLKL 98
           G G S NV  YG L L
Sbjct: 367 GNGDSVNVQLYGQLDL 382


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 277 HCISPTVPRLAL 312
           +C+ P +P+LAL
Sbjct: 594 NCLDPNLPKLAL 605


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +3

Query: 195 FHYVYDMSTCL 227
           + YVYD  TC+
Sbjct: 566 YEYVYDEYTCM 576


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,200
Number of Sequences: 438
Number of extensions: 2142
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)