Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F17
(322 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical p... 97 2e-21
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 31 0.24
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 31 0.24
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 31 0.24
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 31 0.24
Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical pr... 30 0.43
Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical pr... 30 0.43
Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical pr... 30 0.43
Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 0.43
Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical p... 30 0.43
Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical p... 30 0.43
Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical pr... 30 0.43
Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical pr... 30 0.43
U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein. 30 0.43
Z68748-5|CAA92956.2| 446|Caenorhabditis elegans Hypothetical pr... 29 0.99
Z83119-6|CAB05580.2| 591|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical pr... 27 2.3
AL110494-2|CAC14398.1| 591|Caenorhabditis elegans Hypothetical ... 27 2.3
AF005246-1|AAB95119.1| 556|Caenorhabditis elegans voltage-depen... 27 3.0
Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical pr... 27 4.0
Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical pr... 26 5.3
Z81111-4|CAB03264.1| 415|Caenorhabditis elegans Hypothetical pr... 26 5.3
AF106580-4|ABB51181.1| 304|Caenorhabditis elegans Hypothetical ... 26 5.3
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 26 7.0
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 26 7.0
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 26 7.0
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 26 7.0
U70858-6|AAB09180.2| 299|Caenorhabditis elegans Serpentine rece... 26 7.0
U58763-1|AAK68877.2| 559|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical pr... 25 9.2
>Z79754-10|CAB02099.1| 181|Caenorhabditis elegans Hypothetical
protein F25H2.11 protein.
Length = 181
Score = 97.1 bits (231), Expect = 2e-21
Identities = 43/84 (51%), Positives = 63/84 (75%), Gaps = 2/84 (2%)
Frame = +3
Query: 66 MIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIRTQDDIHIDGFNPSAEEA--DEGT 239
M+IYKD+ T DE+ SD++ +KL+D+++YE GK V+R + +I + G NPSAEE D+G+
Sbjct: 1 MLIYKDIFTDDELSSDSFPMKLVDDLVYEFKGKHVVRKEGEIVLAGSNPSAEEGAEDDGS 60
Query: 240 DSNVETGVDIVLNHRLVETYAFGD 311
D +VE G+DIVLNH+LVE + D
Sbjct: 61 DEHVERGIDIVLNHKLVEMNCYED 84
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 579 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 579 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 565 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 605
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 30.7 bits (66), Expect = 0.24
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVLNHRLVETYAF 305
D+ GF+ ++ EG D NVE V+ +RL++ Y F
Sbjct: 579 DEYFHRGFSCECDDGFEGLDCNVEIAWSSVMTNRLMKNYEF 619
>Z47809-8|CAH10845.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622
>Z47809-6|CAD57700.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622
>Z47809-5|CAD57699.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 574 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 625
>Z47809-4|CAA87782.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622
>Z36719-11|CAH04695.1| 968|Caenorhabditis elegans Hypothetical
protein C06C3.1d protein.
Length = 968
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622
>Z36719-10|CAD57686.1| 1124|Caenorhabditis elegans Hypothetical
protein C06C3.1c protein.
Length = 1124
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622
>Z36719-9|CAD57685.1| 1019|Caenorhabditis elegans Hypothetical
protein C06C3.1b protein.
Length = 1019
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 574 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 625
>Z36719-8|CAA85318.1| 1016|Caenorhabditis elegans Hypothetical
protein C06C3.1a protein.
Length = 1016
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622
>U86640-1|AAB47273.1| 1016|Caenorhabditis elegans MEL-11 protein.
Length = 1016
Score = 29.9 bits (64), Expect = 0.43
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 292 STSL*FRTMSTPVSTLESVPSSASSAEGLNPSMWISSCVLITVLPVTS*ITSS 134
STS R+ STPVS + S PSS S PS+ ++ TV P +S + S+
Sbjct: 571 STSSVTRSSSTPVSEIISPPSSIHSQLSF-PSVSNTTTTTATVAPTSSTVPST 622
>Z68748-5|CAA92956.2| 446|Caenorhabditis elegans Hypothetical
protein F13H10.5 protein.
Length = 446
Score = 28.7 bits (61), Expect = 0.99
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 170 HGLAGDFINNFVDQLNF 120
HG+ GD+INN+ D L F
Sbjct: 85 HGIIGDYINNWKDNLKF 101
>Z83119-6|CAB05580.2| 591|Caenorhabditis elegans Hypothetical
protein R05H10.3a protein.
Length = 591
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 36 IILNRLQSIKMIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIR 176
++L RL SI +Y ++ F DT KL+D + +E T TV+R
Sbjct: 3 LLLERLVSI-CSVYDEL---PHSFDDTLIDKLVDSIQFEETSLTVVR 45
>Z68010-3|CAA92011.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVL 275
++ H +E +DEGT+S+ TGVD V+
Sbjct: 513 EENHNHKHREKSENSDEGTNSSSTTGVDTVV 543
>Z67756-4|CAA91765.1| 558|Caenorhabditis elegans Hypothetical
protein R07A4.1 protein.
Length = 558
Score = 27.5 bits (58), Expect = 2.3
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 183 DDIHIDGFNPSAEEADEGTDSNVETGVDIVL 275
++ H +E +DEGT+S+ TGVD V+
Sbjct: 513 EENHNHKHREKSENSDEGTNSSSTTGVDTVV 543
>AL110494-2|CAC14398.1| 591|Caenorhabditis elegans Hypothetical
protein R05H10.3a protein.
Length = 591
Score = 27.5 bits (58), Expect = 2.3
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 36 IILNRLQSIKMIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGKTVIR 176
++L RL SI +Y ++ F DT KL+D + +E T TV+R
Sbjct: 3 LLLERLVSI-CSVYDEL---PHSFDDTLIDKLVDSIQFEETSLTVVR 45
>AF005246-1|AAB95119.1| 556|Caenorhabditis elegans
voltage-dependent potassium channelalpha subunit
protein.
Length = 556
Score = 27.1 bits (57), Expect = 3.0
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 216 AEEADEGTDSNVETGVDIVL 275
+E +DEGT+S+ TGVD V+
Sbjct: 522 SENSDEGTNSSSTTGVDTVV 541
>Z82070-4|CAB04913.2| 227|Caenorhabditis elegans Hypothetical
protein W04E12.4 protein.
Length = 227
Score = 26.6 bits (56), Expect = 4.0
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 120 KVKLIDEVIYEVTGKTVIRTQD-DIHIDGFNPSAEEADEGTDSNVETGV 263
K+++ DE+I G+ V D D ++ S E+D+GTDS++E+ +
Sbjct: 130 KIEMEDEII----GQWVADDSDNDENVKNSPTSEPESDDGTDSDLESEI 174
>Z83216-3|CAB05674.2| 232|Caenorhabditis elegans Hypothetical
protein C08F11.3 protein.
Length = 232
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +3
Query: 18 SRSFGFIILNRLQSIKMIIYKDVITGDEMFSDTYKVKLIDEVIYEVTGK 164
S F F+I+ L I Y VIT ++F K K ++ ++Y GK
Sbjct: 167 SNIFTFLIIFYLVFILRFTYIHVITKRDVFGTFKKTKNVNLLMYSRRGK 215
>Z81111-4|CAB03264.1| 415|Caenorhabditis elegans Hypothetical
protein T01G5.4 protein.
Length = 415
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 164 LAGDFINNFVDQLNFIRIREHLVTSYNILIDYH 66
LA I NF+ ++EHL TS ILI+++
Sbjct: 314 LAAIIIYNFIILSTACALQEHLATSTRILINHY 346
>AF106580-4|ABB51181.1| 304|Caenorhabditis elegans Hypothetical
protein F58B6.1 protein.
Length = 304
Score = 26.2 bits (55), Expect = 5.3
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
Frame = +3
Query: 33 FIILNRLQS---IKMIIYKDVITGDEMFSDTY 119
F+I N L + +KMI + + TGD+ F+DT+
Sbjct: 181 FVIANGLATSSRLKMITFGEPRTGDKAFADTH 212
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 204 FNPSAEEADEGTDSNVETG-VDIVLNH 281
F+PSA +ADE D E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 25.8 bits (54), Expect = 7.0
Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 204 FNPSAEEADEGTDSNVETG-VDIVLNH 281
F+PSA +ADE D E G VD L H
Sbjct: 1236 FSPSASQADETGDRAPERGFVDTALAH 1262
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 116 RIREHLVTSYNILIDYHFDGLEAI*NNKTETTASS 12
R R+HLV ++ + FD L + N+TETT ++
Sbjct: 222 RHRQHLVRKFDPMHFKSFDHLNSTSVNETETTVAT 256
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 25.8 bits (54), Expect = 7.0
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = -3
Query: 116 RIREHLVTSYNILIDYHFDGLEAI*NNKTETTASS 12
R R+HLV ++ + FD L + N+TETT ++
Sbjct: 222 RHRQHLVRKFDPMHFKSFDHLNSTSVNETETTVAT 256
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 25.8 bits (54), Expect = 7.0
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = -3
Query: 146 NNFVDQLNFIRIREHLVTSYNILID 72
N FV +F+ + + + T YN+++D
Sbjct: 648 NGFVYDTSFLLVDQQMTTVYNVIVD 672
>U70858-6|AAB09180.2| 299|Caenorhabditis elegans Serpentine
receptor, class x protein35 protein.
Length = 299
Score = 25.8 bits (54), Expect = 7.0
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -3
Query: 203 SINVDIVLCSDHGLAGDFINNFV 135
+ N+++ +C D+G+ GDF F+
Sbjct: 156 TFNMEVPICFDYGIYGDFGKFFI 178
>U58763-1|AAK68877.2| 559|Caenorhabditis elegans Hypothetical
protein F10C5.2 protein.
Length = 559
Score = 25.8 bits (54), Expect = 7.0
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 81 DVITGDEMFSDTYKVKLIDEVIYEVTGKTVIRTQDDIHID--GFNPSAEEADE 233
D IT DE+++ ++D+ Y+ +RT ++ H D AEE DE
Sbjct: 374 DHITEDEIYAHELTGDVLDDEDYDFNEDYGLRTPNESHFDLEDDEDGAEEWDE 426
>Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical
protein T07G12.10 protein.
Length = 584
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3
Query: 188 IVLCSDHGLAGDFINNFVD 132
I L DH + G F NNFVD
Sbjct: 385 IELSRDHNIEGVFQNNFVD 403
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,525,339
Number of Sequences: 27780
Number of extensions: 148899
Number of successful extensions: 519
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 518
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 376873630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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