Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F15
         (402 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VUZ0 Cluster: CG5474-PA; n=11; Arthropoda|Rep: CG5474...    81   6e-15
UniRef50_P43308 Cluster: Translocon-associated protein subunit b...    74   1e-12
UniRef50_A7SSC3 Cluster: Predicted protein; n=1; Nematostella ve...    67   1e-10
UniRef50_Q5DES5 Cluster: SJCHGC05940 protein; n=1; Schistosoma j...    53   2e-06
UniRef50_Q09JT6 Cluster: Translocon associated complex TRAP beta...    49   4e-05
UniRef50_A5V1J2 Cluster: Methyltransferase type 11; n=1; Roseifl...    34   1.2  
UniRef50_Q22169 Cluster: Putative uncharacterized protein; n=2; ...    33   2.1  
UniRef50_Q9EME2 Cluster: AMV264; n=1; Amsacta moorei entomopoxvi...    32   3.7  
UniRef50_A0Q4C1 Cluster: Serine permease; n=6; Francisella tular...    32   3.7  
UniRef50_Q9JLJ7 Cluster: PTP36-C isoform; n=7; Euteleostomi|Rep:...    31   6.4  
UniRef50_Q15678 Cluster: Tyrosine-protein phosphatase non-recept...    31   6.4  

>UniRef50_Q9VUZ0 Cluster: CG5474-PA; n=11; Arthropoda|Rep: CG5474-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 190

 Score = 81.4 bits (192), Expect = 6e-15
 Identities = 35/54 (64%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           EG IV   +Y+++FSSH  DW AFAVMTLPSLAIP  LW+ SKSKYE+  K KK
Sbjct: 136 EGGIVNLNEYNKRFSSHFFDWVAFAVMTLPSLAIPLALWHQSKSKYERSGKNKK 189


>UniRef50_P43308 Cluster: Translocon-associated protein subunit beta
           precursor; n=33; Coelomata|Rep: Translocon-associated
           protein subunit beta precursor - Homo sapiens (Human)
          Length = 183

 Score = 73.7 bits (173), Expect = 1e-12
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           +G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWYSSK KY+   K KK
Sbjct: 130 QGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKTKK 182


>UniRef50_A7SSC3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 187

 Score = 66.9 bits (156), Expect = 1e-10
 Identities = 27/54 (50%), Positives = 40/54 (74%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           EG +++ KDY RK S H++DW  F++M++P++ IPF +WY S SKYE + K KK
Sbjct: 134 EGGVMSNKDYQRKHSPHLVDWGLFSLMSIPTMLIPFMVWYRSHSKYENI-KAKK 186


>UniRef50_Q5DES5 Cluster: SJCHGC05940 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC05940 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 180

 Score = 52.8 bits (121), Expect = 2e-06
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = -2

Query: 380 KDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKY 264
           K+Y+++F+SH ++W  FA+   P L IP+ LW+SS SKY
Sbjct: 142 KEYNKRFTSHTMEWIGFALFVTPCLLIPYMLWHSSASKY 180


>UniRef50_Q09JT6 Cluster: Translocon associated complex TRAP
           beta-subunit; n=1; Argas monolakensis|Rep: Translocon
           associated complex TRAP beta-subunit - Argas
           monolakensis
          Length = 202

 Score = 48.8 bits (111), Expect = 4e-05
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLP 312
           EG IV  +D+DR+FS H++DW AFAVM+LP
Sbjct: 133 EGGIVPGRDFDRQFSPHVMDWLAFAVMSLP 162


>UniRef50_A5V1J2 Cluster: Methyltransferase type 11; n=1;
           Roseiflexus sp. RS-1|Rep: Methyltransferase type 11 -
           Roseiflexus sp. RS-1
          Length = 303

 Score = 33.9 bits (74), Expect = 1.2
 Identities = 14/38 (36%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
 Frame = -2

Query: 191 VVFFYMCELCD-IYV-PEPETIPERLFYVIPSSYKNYV 84
           + + Y C +C  +Y+ P P+T PE +  + PS+Y++YV
Sbjct: 31  IYYLYQCRICGLVYLSPRPDT-PEEIAEIYPSTYESYV 67


>UniRef50_Q22169 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 188

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKKT 237
           EG I   ++YDR+F+     +  F ++  P+    F L+  SK+++  + K K T
Sbjct: 134 EGYIYRQREYDRRFAPKYTYFLVFFLIVAPTTLGSFLLFQQSKARFPNVIKKKST 188


>UniRef50_Q9EME2 Cluster: AMV264; n=1; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV264 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 279

 Score = 32.3 bits (70), Expect = 3.7
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = -2

Query: 209 SLLMFYVVFFYMCELCDIYVPEPETIPERLF-YVIPSSYKNYVL 81
           SLL++ ++F Y   LCD+   + + + E  F Y+ P+  +N +L
Sbjct: 18  SLLLYGILFGYFIRLCDVICDKNDNVIETKFKYISPNLTRNQIL 61


>UniRef50_A0Q4C1 Cluster: Serine permease; n=6; Francisella
           tularensis|Rep: Serine permease - Francisella tularensis
           subsp. novicida (strain U112)
          Length = 422

 Score = 32.3 bits (70), Expect = 3.7
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = -2

Query: 326 VMTLPSLAIPFGLWYSSKSKYEKLAKPKKTH*LRFVLVQSLLMFYVVFF 180
           + +L  + I + L Y  K K   LAK  KT  L F+++  ++ FYV+ F
Sbjct: 211 IQSLSPMVIGYRLHYRKKDKEFVLAKTLKTMTLAFIILVIIIGFYVLSF 259


>UniRef50_Q9JLJ7 Cluster: PTP36-C isoform; n=7; Euteleostomi|Rep:
           PTP36-C isoform - Mus musculus (Mouse)
          Length = 158

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>UniRef50_Q15678 Cluster: Tyrosine-protein phosphatase non-receptor
           type 14; n=52; Tetrapoda|Rep: Tyrosine-protein
           phosphatase non-receptor type 14 - Homo sapiens (Human)
          Length = 1187

 Score = 31.5 bits (68), Expect = 6.4
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,711,588
Number of Sequences: 1657284
Number of extensions: 4315943
Number of successful extensions: 10910
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10908
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 17349842203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)