Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F15
         (402 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    24   1.8  
AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding pr...    24   1.8  

>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 371 DRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLA 252
           D KF S +LD     V T+  +   FG+ + S S Y+  A
Sbjct: 453 DWKFVSMVLDRFFLWVFTISCIFGTFGIIFQSPSLYDTRA 492


>AY146749-1|AAO12064.1|  336|Anopheles gambiae odorant-binding
           protein AgamOBP38 protein.
          Length = 336

 Score = 24.2 bits (50), Expect = 1.8
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = -1

Query: 360 LISHPRLGSICSHDSPISSYPFRTMVLIEEQI*KTC*T*ENSLVKICFSSIIVNVLCSFF 181
           LI+HP   + C  +   +     TM+ +E+   +TC   E  L +   ++++  V+    
Sbjct: 139 LIAHPAYVAPCGQEIRRAVSDCATMLQVEDGQLQTCVRTETFLRQGNGAALLRCVVLRLG 198

Query: 180 LYVRVV*YLCSRTR 139
           LY      LC R R
Sbjct: 199 LYADSTGVLCDRVR 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 305,973
Number of Sequences: 2352
Number of extensions: 4545
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)