Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F15
         (402 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X74104-1|CAA52207.1|  183|Homo sapiens translocon-associated pro...    74   2e-13
D37991-1|BAA07206.1|  183|Homo sapiens beta-signal sequence rece...    74   2e-13
CR456973-1|CAG33254.1|  183|Homo sapiens SSR2 protein.                 74   2e-13
BC000341-1|AAH00341.2|  183|Homo sapiens signal sequence recepto...    74   2e-13
AL355388-11|CAH72631.1|  202|Homo sapiens signal sequence recept...    74   2e-13
AK222600-1|BAD96320.1|  183|Homo sapiens signal sequence recepto...    74   2e-13
X82676-1|CAA57993.1| 1187|Homo sapiens tyrosine phosphatase prot...    31   1.1  
BC104803-1|AAI04804.1| 1187|Homo sapiens protein tyrosine phosph...    31   1.1  
BC101754-1|AAI01755.1| 1187|Homo sapiens protein tyrosine phosph...    31   1.1  
BC017300-1|AAH17300.1|  498|Homo sapiens PTPN14 protein protein.       31   1.1  
AL929236-1|CAH70919.1| 1187|Homo sapiens protein tyrosine phosph...    31   1.1  
AL603838-1|CAH72982.1| 1187|Homo sapiens protein tyrosine phosph...    31   1.1  
AL592216-1|CAH73479.1| 1187|Homo sapiens protein tyrosine phosph...    31   1.1  
AL445305-1|CAH73027.1| 1187|Homo sapiens protein tyrosine phosph...    31   1.1  
AK021593-1|BAB13849.1|  128|Homo sapiens protein ( Homo sapiens ...    30   3.3  

>X74104-1|CAA52207.1|  183|Homo sapiens translocon-associated
           protein protein.
          Length = 183

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           +G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWYSSK KY+   K KK
Sbjct: 130 QGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKTKK 182


>D37991-1|BAA07206.1|  183|Homo sapiens beta-signal sequence
           receptor protein.
          Length = 183

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           +G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWYSSK KY+   K KK
Sbjct: 130 QGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKTKK 182


>CR456973-1|CAG33254.1|  183|Homo sapiens SSR2 protein.
          Length = 183

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           +G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWYSSK KY+   K KK
Sbjct: 130 QGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKTKK 182


>BC000341-1|AAH00341.2|  183|Homo sapiens signal sequence receptor,
           beta (translocon-associated protein beta) protein.
          Length = 183

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           +G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWYSSK KY+   K KK
Sbjct: 130 QGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKTKK 182


>AL355388-11|CAH72631.1|  202|Homo sapiens signal sequence receptor,
           beta (translocon-associated protein beta) protein.
          Length = 202

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           +G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWYSSK KY+   K KK
Sbjct: 149 QGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKTKK 201


>AK222600-1|BAD96320.1|  183|Homo sapiens signal sequence receptor,
           beta precursor variant protein.
          Length = 183

 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/54 (61%), Positives = 41/54 (75%)
 Frame = -2

Query: 401 EGAIVAFKDYDRKFSSHILDWAAFAVMTLPSLAIPFGLWYSSKSKYEKLAKPKK 240
           +G I+A +++DR+FS H LDWAAF VMTLPS+ IP  LWYSSK KY+   K KK
Sbjct: 130 QGGILAQREFDRRFSPHFLDWAAFGVMTLPSIGIPLLLWYSSKRKYD-TPKTKK 182


>X82676-1|CAA57993.1| 1187|Homo sapiens tyrosine phosphatase
           protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>BC104803-1|AAI04804.1| 1187|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 14 protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>BC101754-1|AAI01755.1| 1187|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 14 protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>BC017300-1|AAH17300.1|  498|Homo sapiens PTPN14 protein protein.
          Length = 498

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>AL929236-1|CAH70919.1| 1187|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 14 protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>AL603838-1|CAH72982.1| 1187|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 14 protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>AL592216-1|CAH73479.1| 1187|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 14 protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>AL445305-1|CAH73027.1| 1187|Homo sapiens protein tyrosine
           phosphatase, non-receptor type 14 protein.
          Length = 1187

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = -2

Query: 296 FGLWYSSKS---KYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYM 174
           FGLW+ SKS   ++ +L KP K H  +F      L+F+ V FY+
Sbjct: 62  FGLWFLSKSQQARWVELEKPLKKHLDKF--ANEPLLFFGVMFYV 103


>AK021593-1|BAB13849.1|  128|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11531 fis, clone HEMBA1002661. ).
          Length = 128

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 13/48 (27%), Positives = 27/48 (56%)
 Frame = -2

Query: 308 LAIPFGLWYSSKSKYEKLAKPKKTH*LRFVLVQSLLMFYVVFFYMCEL 165
           +++  GLW+SSK  +  L      + + FV + ++ +F +++ Y C L
Sbjct: 26  ISLSSGLWFSSKRSFASLVSFIPRYFILFVAIMNVSLF-MIWLYACML 72


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,180,501
Number of Sequences: 237096
Number of extensions: 670381
Number of successful extensions: 1202
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)