Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F14
         (372 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P24852 Cluster: Small t antigen; n=2; Bovine polyomavir...    36   0.23 
UniRef50_UPI0001509BAE Cluster: hypothetical protein TTHERM_0049...    35   0.54 
UniRef50_Q8BTE5 Cluster: 18-day embryo whole body cDNA, RIKEN fu...    34   0.95 
UniRef50_Q96YE2 Cluster: Putative uncharacterized protein STS235...    32   2.9  
UniRef50_Q5QWJ5 Cluster: Predicted exporter, RND superfamily; n=...    31   6.7  
UniRef50_Q5FA37 Cluster: Putative oxidoreductase; n=4; Neisseria...    31   6.7  
UniRef50_Q22AH6 Cluster: IP3 receptor calcium ion channel protei...    31   6.7  
UniRef50_Q16LJ9 Cluster: Putative uncharacterized protein; n=1; ...    31   6.7  
UniRef50_Q4A8D7 Cluster: Myo-inositol 2-dehydrogenase; n=5; Myco...    31   8.8  
UniRef50_Q6C6D3 Cluster: Similar to tr|Q8TF96 Aspergillus oryzae...    31   8.8  

>UniRef50_P24852 Cluster: Small t antigen; n=2; Bovine
           polyomavirus|Rep: Small t antigen - Bovine polyomavirus
           (BPyV)
          Length = 124

 Score = 35.9 bits (79), Expect = 0.23
 Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
 Frame = +3

Query: 69  EYWEYLILFYYAHKNPQVWIPKICWL-FTKNCVHS-*SGGLCSILRLL 206
           + W +LI+ Y + KN  +++PKI WL F     HS  SGG  SI  L+
Sbjct: 68  QVWYFLIIGYISLKNKNIYLPKIFWLRFQNMAPHSGNSGGKNSIKALM 115


>UniRef50_UPI0001509BAE Cluster: hypothetical protein
           TTHERM_00497850; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00497850 - Tetrahymena
           thermophila SB210
          Length = 1212

 Score = 34.7 bits (76), Expect = 0.54
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 280 SNFLGSNYDFCTYKSGNHDRC*VCTNNRKILQRPPLQL*TQFLVKSQQIF 131
           +N L + Y+FCTY+  N  +    + N +I+  P LQ  +Q L   QQI+
Sbjct: 360 TNQLQNQYNFCTYQQTNQSQINFQSQNNQIINSPILQS-SQVLQSQQQIY 408


>UniRef50_Q8BTE5 Cluster: 18-day embryo whole body cDNA, RIKEN
           full-length enriched library, clone:1110001A16
           product:hypothetical protein, full insert sequence; n=7;
           Eutheria|Rep: 18-day embryo whole body cDNA, RIKEN
           full-length enriched library, clone:1110001A16
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 80

 Score = 33.9 bits (74), Expect = 0.95
 Identities = 19/62 (30%), Positives = 30/62 (48%)
 Frame = +1

Query: 154 KTVFIVEAAAFAVSYGCWYRLNTDRDFRFYMYKNHNWILESYYALGEKIADQKTRQLDQA 333
           K V   E    A +Y  + ++++ +DFR  M K   +ILE YY   E+      R+ D+ 
Sbjct: 14  KGVLAAELVGVAGAYCLFKKMHSSQDFRQTMSKKFPFILEVYYKSIEQSGMYGVREKDEE 73

Query: 334 FW 339
            W
Sbjct: 74  KW 75


>UniRef50_Q96YE2 Cluster: Putative uncharacterized protein STS235;
           n=1; Sulfolobus tokodaii|Rep: Putative uncharacterized
           protein STS235 - Sulfolobus tokodaii
          Length = 67

 Score = 32.3 bits (70), Expect = 2.9
 Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = +3

Query: 75  WEYLILFYYAHKNPQVWIPKICWLFTK-NCV 164
           W    L +Y + NP  W   +CW  T  NC+
Sbjct: 25  WRMFALAHYKYDNPCKWFSNLCWFHTPINCI 55


>UniRef50_Q5QWJ5 Cluster: Predicted exporter, RND superfamily; n=4;
           Gammaproteobacteria|Rep: Predicted exporter, RND
           superfamily - Idiomarina loihiensis
          Length = 838

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +1

Query: 58  LFWTNIGNI*FYSIMLTKTPK-SGFRKFVGFSLKTVFIVEAAAFAVSYGCWYRLNTDRDF 234
           LF +   +I FYS+MLT  P    F  FVG  +   F++    F  +Y C  + +T   F
Sbjct: 316 LFTSITSSIGFYSLMLTPIPPVQVFGAFVGSGILLAFLI-TVLFVPAYICALKPSTLESF 374

Query: 235 RFYMYKNH 258
               +  H
Sbjct: 375 TQVTHDEH 382


>UniRef50_Q5FA37 Cluster: Putative oxidoreductase; n=4;
           Neisseria|Rep: Putative oxidoreductase - Neisseria
           gonorrhoeae (strain ATCC 700825 / FA 1090)
          Length = 466

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 57  LILDEYWEYLILFYYAHKNPQVWIPKI-CWLFTKNCVHS*S-GGLCSILRL 203
           +I  ++ EYL  +Y++  NP    PK+ C L  + C+      GLC+ L L
Sbjct: 36  MIRPDFQEYLPSYYFSSVNPHTVYPKLQCRLKAETCIIGGGLSGLCTALPL 86


>UniRef50_Q22AH6 Cluster: IP3 receptor calcium ion channel protein;
            n=1; Tetrahymena thermophila SB210|Rep: IP3 receptor
            calcium ion channel protein - Tetrahymena thermophila
            SB210
          Length = 3238

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 232  FRFYMYKNHNWILESYYALGEKIADQKTRQL 324
            F  Y YKNH ++   Y    +KI  QK R++
Sbjct: 2849 FFIYWYKNHQFLFSEYVFNNQKIVKQKQREI 2879


>UniRef50_Q16LJ9 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 459

 Score = 31.1 bits (67), Expect = 6.7
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = +1

Query: 187 AVSYGCWYRLNTDRDFRFYMYKNHNWILESYYALGEKIADQKTRQLD 327
           A+ Y C  R N   DFR  + +NHN +       G++  ++ T  ++
Sbjct: 60  AICYSCLDRFNNFHDFRRMVVRNHNAVKTFRRLFGDQYDEEPTTMIE 106


>UniRef50_Q4A8D7 Cluster: Myo-inositol 2-dehydrogenase; n=5;
           Mycoplasma hyopneumoniae|Rep: Myo-inositol
           2-dehydrogenase - Mycoplasma hyopneumoniae (strain 7448)
          Length = 339

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 229 DFRFYMYKNHNWILESYYALGEKIADQKTRQLD 327
           DF   ++  +N ++ES YA G  + D+K  +LD
Sbjct: 179 DFDMALFLTNNKVVESIYATGSALIDKKINELD 211


>UniRef50_Q6C6D3 Cluster: Similar to tr|Q8TF96 Aspergillus oryzae
           CHSZ chitin synthase; n=1; Yarrowia lipolytica|Rep:
           Similar to tr|Q8TF96 Aspergillus oryzae CHSZ chitin
           synthase - Yarrowia lipolytica (Candida lipolytica)
          Length = 1345

 Score = 30.7 bits (66), Expect = 8.8
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +1

Query: 148 SLKTVFIVEAAAFAVSY--GCWYRLNTDRDFRFYMYKNHNWILE-SYYALGEKIAD--QK 312
           SL+++  ++     +SY  G W R N       Y+ ++  WI E +Y  L  K A+  Q 
Sbjct: 325 SLQSILPLDVCEHPLSYYIGLWARNNVGSASEIYVGRDRVWISENTYRKLEAKYAEFSQT 384

Query: 313 TRQLDQAFWTGEG 351
           T   +Q  W  +G
Sbjct: 385 TPVQEQGEWAAQG 397


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 362,840,589
Number of Sequences: 1657284
Number of extensions: 6800459
Number of successful extensions: 14566
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14563
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 13594373344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)