Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F14
         (372 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   0.66 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    24   0.66 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   0.66 
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                23   0.88 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   2.0  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   4.7  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   6.2  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.2  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    20   8.2  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 91  YSIMLTKTPKS-GFRKFVGFSLKTVFIVEAAAFAVSYG 201
           Y++   K P++    KF+GF++ T  I+  A   + +G
Sbjct: 691 YAVKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFG 728


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 217 NTDRDFRFYMYKNHNW 264
           NT RDF +YMY    +
Sbjct: 330 NTPRDFPYYMYSREQY 345


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 0.66
 Identities = 11/38 (28%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 91  YSIMLTKTPKS-GFRKFVGFSLKTVFIVEAAAFAVSYG 201
           Y++   K P++    KF+GF++ T  I+  A   + +G
Sbjct: 781 YAVKTRKIPENFNESKFIGFTMYTTCIIWLAFVPIYFG 818


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 23.4 bits (48), Expect = 0.88
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 308 KKHVSLIKHSGLVK 349
           +KH S +KHS +VK
Sbjct: 108 EKHASFLKHSNIVK 121


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +1

Query: 223 DRDFRFYMYKNHNWILESYYA 285
           D D+ FY Y N    LES  A
Sbjct: 26  DFDYYFYDYSNRTQALESIIA 46



 Score = 21.4 bits (43), Expect = 3.5
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 209 TDLTPIVISAFICTKIIIG 265
           T  + +VI+A ICT  I+G
Sbjct: 133 TGWSAVVITAAICTSGIVG 151


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.0 bits (42), Expect = 4.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 74  LGISDFILLCSQKPPSL 124
           L +SD +LL S  PP +
Sbjct: 95  LAVSDLLLLISGLPPEI 111


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 74  LGISDFILLCSQKPP 118
           L ISDF+++    PP
Sbjct: 60  LAISDFLMMFCMSPP 74


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 210  VPTTVRYCK 184
            VPTTV YC+
Sbjct: 1200 VPTTVTYCQ 1208


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 20.6 bits (41), Expect = 6.2
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -1

Query: 210  VPTTVRYCK 184
            VPTTV YC+
Sbjct: 1196 VPTTVTYCQ 1204


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 20.2 bits (40), Expect = 8.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +1

Query: 223 DRDFRFYMYKNHNWI 267
           D DFR  M+   +WI
Sbjct: 29  DMDFRVDMFVRQSWI 43


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,699
Number of Sequences: 438
Number of extensions: 2232
Number of successful extensions: 15
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8928360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)