BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0002_F13 (429 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory recept... 26 0.17 AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 25 0.23 AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 25 0.23 AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 25 0.23 AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 25 0.23 DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. 24 0.70 AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 21 5.0 AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 21 5.0 >AM292359-1|CAL23171.2| 436|Tribolium castaneum gustatory receptor candidate 38 protein. Length = 436 Score = 25.8 bits (54), Expect = 0.17 Identities = 11/32 (34%), Positives = 20/32 (62%) Frame = +3 Query: 321 IVTNWDDMEKIWHHTFYNELRVAPEEQPVLLT 416 +VT+W + E+I++ +L V +PV+LT Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189 >AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase variant 2 protein. Length = 1558 Score = 25.4 bits (53), Expect = 0.23 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 Query: 359 MPDLLHIVPVGDDAVFD 309 +PD+ I+P GDD D Sbjct: 355 LPDISEIIPTGDDTTMD 371 >AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase variant 1 protein. Length = 1558 Score = 25.4 bits (53), Expect = 0.23 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 Query: 359 MPDLLHIVPVGDDAVFD 309 +PD+ I+P GDD D Sbjct: 355 LPDISEIIPTGDDTTMD 371 >AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B protein. Length = 1558 Score = 25.4 bits (53), Expect = 0.23 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 Query: 359 MPDLLHIVPVGDDAVFD 309 +PD+ I+P GDD D Sbjct: 355 LPDISEIIPTGDDTTMD 371 >AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A protein. Length = 1558 Score = 25.4 bits (53), Expect = 0.23 Identities = 8/17 (47%), Positives = 11/17 (64%) Frame = -2 Query: 359 MPDLLHIVPVGDDAVFD 309 +PD+ I+P GDD D Sbjct: 355 LPDISEIIPTGDDTTMD 371 >DQ493452-1|ABF48588.1| 305|Tribolium castaneum hedgehog protein. Length = 305 Score = 23.8 bits (49), Expect = 0.70 Identities = 14/44 (31%), Positives = 22/44 (50%) Frame = -2 Query: 218 VTRSPHDRGKYGAGSVVSRETGFAHSGPIVYDQRGNFLVAHCEL 87 +T S DR KYG + ++ E GF + Y+ R + HC + Sbjct: 60 ITTSDRDRSKYGMLARLAVEAGFDW---VYYESRAHI---HCSV 97 >AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain transcription factor Fushitarazu protein. Length = 290 Score = 21.0 bits (42), Expect = 5.0 Identities = 6/15 (40%), Positives = 11/15 (73%) Frame = +1 Query: 142 ECAKPVSRETTLPAP 186 +CAKP+++ +P P Sbjct: 272 DCAKPLTQIRNIPGP 286 >AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. Length = 290 Score = 21.0 bits (42), Expect = 5.0 Identities = 6/15 (40%), Positives = 11/15 (73%) Frame = +1 Query: 142 ECAKPVSRETTLPAP 186 +CAKP+++ +P P Sbjct: 272 DCAKPLTQIRNIPGP 286 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 99,744 Number of Sequences: 336 Number of extensions: 2002 Number of successful extensions: 8 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 122,585 effective HSP length: 52 effective length of database: 105,113 effective search space used: 9460170 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
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