Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F13
(429 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 216 5e-57
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 216 5e-57
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 215 1e-56
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 215 1e-56
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 215 1e-56
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 215 1e-56
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 215 1e-56
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 215 2e-56
12_02_1282 + 27528159-27529148,27529549-27529614 214 3e-56
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 214 3e-56
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 100 4e-22
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 76 1e-14
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 71 4e-13
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 60 1e-09
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 56 2e-08
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 46 2e-05
04_03_0738 + 19169764-19169897,19169987-19170116,19170614-191706... 43 1e-04
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 38 0.003
07_03_0401 + 17724103-17724463,17724554-17724683,17725068-177250... 34 0.042
07_03_0143 - 14315097-14315130,14315594-14315662,14316152-143162... 31 0.39
11_06_0102 + 20112731-20112928,20113314-20113514,20113606-201136... 29 1.2
12_02_1151 + 26488686-26488792,26488897-26489142,26490246-264903... 29 2.1
06_03_0013 - 15393830-15394060,15394238-15394672 28 2.8
05_05_0357 + 24377989-24378039,24378601-24378632,24378724-243788... 28 3.7
12_01_0843 + 7891622-7892524 27 4.9
02_05_0477 - 29339649-29340253,29340880-29341492 27 4.9
12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702 27 6.4
04_04_0692 - 27307349-27307728,27308381-27308546 27 8.5
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 216 bits (528), Expect = 5e-57
Identities = 96/111 (86%), Positives = 103/111 (92%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
M DE++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MADEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
+KRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPE+ PVLLTEAPL
Sbjct: 61 AKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPL 111
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 216 bits (528), Expect = 5e-57
Identities = 96/111 (86%), Positives = 103/111 (92%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
M +E++ +V DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQ
Sbjct: 1 MAEEDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE PVLLTEAP+
Sbjct: 61 SKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPM 111
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 215 bits (526), Expect = 1e-56
Identities = 97/108 (89%), Positives = 102/108 (94%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 215 bits (526), Expect = 1e-56
Identities = 97/108 (89%), Positives = 102/108 (94%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 215 bits (526), Expect = 1e-56
Identities = 97/108 (89%), Positives = 102/108 (94%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 215 bits (526), Expect = 1e-56
Identities = 97/108 (89%), Positives = 102/108 (94%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 215 bits (525), Expect = 1e-56
Identities = 96/108 (88%), Positives = 102/108 (94%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE P+LLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL 112
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 215 bits (524), Expect = 2e-56
Identities = 96/108 (88%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE P+LLTEAPL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL 112
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 214 bits (522), Expect = 3e-56
Identities = 96/108 (88%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
+++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 DDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 214 bits (522), Expect = 3e-56
Identities = 96/108 (88%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE P LLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPALLTEAPL 112
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 100 bits (240), Expect = 4e-22
Identities = 48/105 (45%), Positives = 65/105 (61%), Gaps = 2/105 (1%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 293
+V DNG+G K GFAG++ P +VFP +VGRP R++ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 294 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
+ YP+ +GIV +WDDM IW H FY+EL+V P E +LLT+ PL
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPL 111
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 76.2 bits (179), Expect = 1e-14
Identities = 45/122 (36%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH---QGVMVG------------MGQKD 251
A+V+DNG+G K GF+G+ P P++V Q M M D
Sbjct: 8 AVVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADLD 67
Query: 252 SYVGDEAQS---KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEA 422
++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEE LLT++
Sbjct: 68 FFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLTDS 127
Query: 423 PL 428
P+
Sbjct: 128 PV 129
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 70.9 bits (166), Expect = 4e-13
Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV-------GRPRH---QGVMVG------MGQK 248
A+V+DNG+G K GFAG+ P + P++V G+ R +G + M
Sbjct: 8 AVVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL 67
Query: 249 DSYVGDEAQSKR---GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE+ LLTE
Sbjct: 68 DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLLTE 127
Query: 420 APL 428
+PL
Sbjct: 128 SPL 130
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 59.7 bits (138), Expect = 1e-09
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 3/103 (2%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR---GI 290
+V+DNG G+ KAGF GD P AV P+ + +P G K V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKP--------PGSKKWLVADQLQAQDVDVTG 59
Query: 291 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
+TL+ PI+ G + N + ++W N L+V P +LL E
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVE 102
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 55.6 bits (128), Expect = 2e-08
Identities = 22/55 (40%), Positives = 35/55 (63%)
Frame = +3
Query: 255 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
YVG E + +R + + P++ G VT+WD ++ IW+H F L + PEE P+L+ E
Sbjct: 120 YVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQRLLINPEEHPMLIAE 174
Score = 52.0 bits (119), Expect = 2e-07
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI 200
+EV+A+V+D GS CKAG+AGDD P+AVFPS+
Sbjct: 5 DEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 45.6 bits (103), Expect = 2e-05
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG---VMVGMGQKDSYVGDEAQSKRGI 290
+V+DNG+ + G+AG+ PR F +IV RPRH+ + +G D + R
Sbjct: 22 IVIDNGASTFRIGWAGEAEPRVAFRNIVQRPRHRSSGETVTVVGDTDPALMKYFDCTRS- 80
Query: 291 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
++ P + +V ++ ME I F + P+L+TE
Sbjct: 81 -AIRSPFDDDVVYQFEYMEYILDFGFDRLGATSEVGHPILMTE 122
>04_03_0738 +
19169764-19169897,19169987-19170116,19170614-19170687,
19171208-19171288,19172054-19172087
Length = 150
Score = 42.7 bits (96), Expect = 1e-04
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 306 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
P++ G +WD ++ IW+H F L + PEE P+L+ E
Sbjct: 92 PMKDGTFIDWDIVDNIWNHAFRQRLLINPEEHPMLIVE 129
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 37.9 bits (84), Expect = 0.003
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 293
A+VVD GS + KAG A D +P V PS + + +D +GD A + +
Sbjct: 3 AVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV- 51
Query: 294 TLKYPIEHGIVTNWDDMEKIWHHTFYNELR-VAPEEQPVLLTE 419
P+ G V +WD ME + ++ Y+ + +E +L TE
Sbjct: 52 ---QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTE 91
>07_03_0401 +
17724103-17724463,17724554-17724683,17725068-17725083,
17725130-17725203,17725693-17725761,17726224-17726257
Length = 227
Score = 34.3 bits (75), Expect = 0.042
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +3
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
++R + + P++ G +WD ++ IW+H F PEE P+L+ E
Sbjct: 163 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYPEEHPMLIVE 206
>07_03_0143 -
14315097-14315130,14315594-14315662,14316152-14316225,
14316316-14316331,14316716-14316845,14316936-14316999
Length = 128
Score = 31.1 bits (67), Expect = 0.39
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
++R + + P++ G +WD ++ IW+H F EE P+L+ E
Sbjct: 64 NRRDHMEVISPMKDGTFIDWDIVDNIWNHAF----SFYAEEHPMLIVE 107
>11_06_0102 +
20112731-20112928,20113314-20113514,20113606-20113695,
20114269-20114457,20115375-20115387,20115824-20115990,
20117334-20117522,20118940-20119053,20120912-20121010,
20122368-20122490,20122579-20122701,20123179-20123277,
20124786-20124842,20125136-20125182,20125296-20125439,
20125540-20125717,20126318-20126398,20126480-20126563,
20126624-20126629
Length = 733
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/20 (50%), Positives = 17/20 (85%)
Frame = -2
Query: 365 GVMPDLLHIVPVGDDAVFDG 306
G++ DL+++ VGDDA++DG
Sbjct: 405 GLIRDLIYVGAVGDDAIYDG 424
>12_02_1151 +
26488686-26488792,26488897-26489142,26490246-26490381,
26490502-26490561,26490648-26490740,26491421-26491663,
26491828-26491968,26492312-26492482,26492813-26492899,
26492954-26493211,26493300-26493445,26493535-26493922,
26493935-26494092,26494267-26494540,26494721-26494894
Length = 893
Score = 28.7 bits (61), Expect = 2.1
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +3
Query: 237 MGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLT 416
+ + DS + D Q K + +K+P G+V + W H Y V P+ + V +T
Sbjct: 387 IARNDSIIVDICQRKGSVGQIKFPSLAGVVVALLFLLPKWTHGQYKSTLVCPDCRKVSVT 446
Query: 417 EAP 425
P
Sbjct: 447 FDP 449
>06_03_0013 - 15393830-15394060,15394238-15394672
Length = 221
Score = 28.3 bits (60), Expect = 2.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 205 GDLVTRASWSAWVRRTPT*VMRHRAR 282
G + R +W+AW RRTP V H R
Sbjct: 163 GTVAKRRAWAAWTRRTPN-VWNHDYR 187
>05_05_0357 +
24377989-24378039,24378601-24378632,24378724-24378818,
24379165-24379237,24379804-24379867,24380465-24380732,
24381132-24381202,24382028-24382084,24382302-24382403,
24382544-24382588,24383616-24383693,24384350-24384400,
24384475-24384556,24384883-24384956,24386093-24386144,
24386230-24386288,24386380-24386456,24386692-24386778,
24387011-24387101
Length = 502
Score = 27.9 bits (59), Expect = 3.7
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = -2
Query: 359 MPDLLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADH---DALVTRSP-HDRG 192
+PD L V + A F FEC PL + + +G L+ D DAL+ P +
Sbjct: 323 LPDFLEQVSANEIASFPFSFECRKAPL-IVYVHQIGYLMCFFDEKISDALLIGLPDFEFA 381
Query: 191 KYGAGSVVSRETGFAHSGPI 132
+ + V +T SG I
Sbjct: 382 EMTVDTFVPNDTKIRSSGRI 401
>12_01_0843 + 7891622-7892524
Length = 300
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAV 188
E+V ++ D GSG +AG GD AP V
Sbjct: 170 EDVTSVWRDGGSGAARAGDDGDGAPAFV 197
>02_05_0477 - 29339649-29340253,29340880-29341492
Length = 405
Score = 27.5 bits (58), Expect = 4.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 203
+ VAALV N G+ + G+DA A PS++
Sbjct: 44 DAVAALVASNEDGVVEGEGEGEDAAEAPAPSVL 76
>12_02_0147 + 14403046-14403285,14403371-14404078,14404145-14404702
Length = 501
Score = 27.1 bits (57), Expect = 6.4
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 126 VDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSY 257
++N S K GF + V +++G P H G + G+ K S+
Sbjct: 322 IENLSSSQKKGFFKPKREKDVLSTVLGTPEHGGRVRGVSSKMSW 365
>04_04_0692 - 27307349-27307728,27308381-27308546
Length = 181
Score = 26.6 bits (56), Expect = 8.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -3
Query: 202 TIEGNTARGASSPAKPALHIPDPLSTTNAATSSS 101
T+ G+ A G + AKP+ DP +TT TSS+
Sbjct: 123 TLSGSAA-GGTRLAKPSSSDADPTTTTTTRTSSA 155
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,487,722
Number of Sequences: 37544
Number of extensions: 281309
Number of successful extensions: 882
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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