Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F13
         (429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.         241   6e-66
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.         241   6e-66
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.         241   6e-66
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.          232   3e-63
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   1.1  
AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding pr...    22   8.0  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   8.0  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  241 bits (591), Expect = 6e-66
 Identities = 110/111 (99%), Positives = 110/111 (99%)
 Frame = +3

Query: 96  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  241 bits (591), Expect = 6e-66
 Identities = 110/111 (99%), Positives = 110/111 (99%)
 Frame = +3

Query: 96  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score =  241 bits (591), Expect = 6e-66
 Identities = 110/111 (99%), Positives = 110/111 (99%)
 Frame = +3

Query: 96  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
           MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score =  232 bits (568), Expect = 3e-63
 Identities = 103/111 (92%), Positives = 107/111 (96%)
 Frame = +3

Query: 96  MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
           MCD++  ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG KD+YVGDEAQ
Sbjct: 1   MCDDDAGALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGNKDAYVGDEAQ 60

Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
           SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61  SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 103 TRKLPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRT 252
           T+   +WS  + P  A  + R++ L   YF  S G  + R   +AW   T
Sbjct: 196 TQSAIKWSSHLDPLFANNIERDSALSWQYFGSSTG-FLRRFPGTAWPPET 244


>AY330181-1|AAQ16287.1|  156|Anopheles gambiae odorant-binding
           protein AgamOBP55 protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 90  FTMCDEEVAALVVDNGSGMC 149
           + +C E+ A   +DNG+ MC
Sbjct: 42  YRVCHEQHATPQMDNGTVMC 61


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 203 GATSSPGRHGRHGSEGL 253
           G    PG+ G  GSEGL
Sbjct: 356 GPVGLPGQKGDRGSEGL 372


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,455
Number of Sequences: 2352
Number of extensions: 9138
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)