Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F13
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 240 3e-64
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 240 3e-64
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 240 3e-64
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 240 3e-64
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 240 3e-64
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 240 3e-64
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 239 6e-64
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 237 2e-63
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 233 3e-62
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 202 1e-52
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 1e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 5e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 147 3e-36
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 129 1e-30
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 100 5e-22
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 83 8e-17
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 48 4e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 48 4e-06
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 45 2e-05
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 34 0.050
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 0.81
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 29 1.9
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 29 1.9
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 29 1.9
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 29 1.9
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 28 2.5
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 2.5
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.3
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 27 7.5
Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 27 7.5
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 26 10.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 240 bits (588), Expect = 3e-64
Identities = 109/111 (98%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 240 bits (588), Expect = 3e-64
Identities = 109/111 (98%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 240 bits (588), Expect = 3e-64
Identities = 109/111 (98%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 240 bits (588), Expect = 3e-64
Identities = 109/111 (98%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 240 bits (588), Expect = 3e-64
Identities = 109/111 (98%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 240 bits (588), Expect = 3e-64
Identities = 109/111 (98%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 239 bits (585), Expect = 6e-64
Identities = 108/111 (97%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 237 bits (581), Expect = 2e-63
Identities = 106/111 (95%), Positives = 110/111 (99%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 111
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 233 bits (571), Expect = 3e-62
Identities = 105/109 (96%), Positives = 108/109 (99%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 281
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 282 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEE PVLLTEAPL
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 110
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 202 bits (492), Expect = 1e-52
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = +3
Query: 150 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 329
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 330 NWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 97
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKI 353
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKI 353
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 1e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDMEKI 353
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 5e-46
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 275
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 276 SKRGILTLKYPIEHGIVTNWDDM 344
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 147 bits (357), Expect = 3e-36
Identities = 66/67 (98%), Positives = 66/67 (98%)
Frame = +3
Query: 228 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPV 407
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE PV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 408 LLTEAPL 428
LLTEAPL
Sbjct: 61 LLTEAPL 67
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 129 bits (311), Expect = 1e-30
Identities = 55/104 (52%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 299
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 300 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEQPVLLTEAPL 428
+YP+EHGIV NW DMEKIW + F ++L++ PEE PVLLT+APL
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPL 114
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 100 bits (239), Expect = 5e-22
Identities = 51/106 (48%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 293
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 294 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEQPVLLTEAPL 428
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PL
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPL 114
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 83.0 bits (196), Expect = 8e-17
Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 13/124 (10%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 239
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 240 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLT 416
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+ LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 417 EAPL 428
E PL
Sbjct: 121 EPPL 124
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/103 (29%), Positives = 49/103 (47%)
Frame = +3
Query: 111 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 290
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 291 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
++ PIE G V NWD ++IW TF + V + LT+
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTD 98
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 47.6 bits (108), Expect = 4e-06
Identities = 30/103 (29%), Positives = 49/103 (47%)
Frame = +3
Query: 111 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 290
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 291 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTE 419
++ PIE G V NWD ++IW TF + V + LT+
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTD 98
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 45.2 bits (102), Expect = 2e-05
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 17/123 (13%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 278
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 279 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLL 413
KR G + P ++ G++ +W+ EKI H++ N L P E PVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 414 TEA 422
+E+
Sbjct: 129 SES 131
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.050
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -3
Query: 241 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPL 131
P T TP RGRP I + ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 0.81
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 203 GATSSPGRHGRHGSEG 250
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 214 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 104
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 641 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 675
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 214 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 104
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 214 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 104
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 28.7 bits (61), Expect = 1.9
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3
Query: 214 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 104
R P +E + +SSPA P++ P P +T++ +TSS
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSS 676
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.3 bits (60), Expect = 2.5
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = -3
Query: 325 TMPCSMGYLSVRIPLLLCASSPT*ESF*PMPTMTPW*RGRPTIEGN-TARGASSPAKPAL 149
T+ S PL++ +SS S T+TP +G PT N S+P P
Sbjct: 451 TLTLSQSPTPTSTPLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKS 510
Query: 148 HIPDPLSTTNAATSSS 101
+ STT A +++S
Sbjct: 511 TVTASPSTTGATSTAS 526
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 2.5
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +2
Query: 203 GATSSPGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 340
G PGRHGRHGS R G + G PH H H H GR
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 150 KAGFAGDDAPRAVFPSIVGRPRHQG 224
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 204 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 368
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.6 bits (56), Expect = 7.5
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +3
Query: 204 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 368
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z78415-7|CAH60759.1| 844|Caenorhabditis elegans Hypothetical
protein C17G1.4b protein.
Length = 844
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 215 SPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQL 334
+PG HG GS L ++Q+ H +PH +++ L
Sbjct: 373 TPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
>Z78415-5|CAB01670.1| 925|Caenorhabditis elegans Hypothetical
protein C17G1.4a protein.
Length = 925
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 215 SPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQL 334
+PG HG GS L ++Q+ H +PH +++ L
Sbjct: 373 TPGSHGTVGSNAPLSHQKPSQQQQSMHNHLPHHQYNQNNL 412
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 26.6 bits (56), Expect = 7.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +3
Query: 321 IVTNWDDMEKIWHHTFYNELRVAPEEQPVLL 413
++ NWD EK W TF+ L+ E P+ L
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCI-REMPIPL 411
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = +3
Query: 330 NWDDMEKIWHHTFYNE--LRVAPEEQPV 407
+++D++ IWHH Y E L+ E PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,866,494
Number of Sequences: 27780
Number of extensions: 207874
Number of successful extensions: 763
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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