Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F13
(429 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 215 8e-57
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 215 8e-57
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 215 1e-56
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 215 1e-56
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 215 1e-56
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 215 1e-56
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 210 3e-55
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 210 3e-55
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 210 3e-55
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 202 1e-52
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 149 6e-37
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 120 3e-28
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 111 1e-25
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 93 7e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 6e-18
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 77 7e-15
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 61 3e-10
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 46 8e-06
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 40 0.001
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 32 0.14
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 31 0.44
At4g24680.1 68417.m03533 expressed protein 28 2.3
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 2.3
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 2.3
At2g33280.1 68415.m04079 integral membrane transporter family pr... 28 3.1
At3g05750.1 68416.m00646 expressed protein 27 4.1
At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger) fa... 27 4.1
At5g17960.1 68418.m02106 DC1 domain-containing protein contains ... 27 5.4
At3g48860.2 68416.m05337 expressed protein 26 9.4
At3g48860.1 68416.m05336 expressed protein 26 9.4
At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) simi... 26 9.4
At2g44130.1 68415.m05489 kelch repeat-containing F-box family pr... 26 9.4
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 26 9.4
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 215 bits (526), Expect = 8e-57
Identities = 97/108 (89%), Positives = 102/108 (94%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 215 bits (526), Expect = 8e-57
Identities = 97/108 (89%), Positives = 102/108 (94%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 215 bits (525), Expect = 1e-56
Identities = 97/108 (89%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 215 bits (525), Expect = 1e-56
Identities = 97/108 (89%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 112
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 215 bits (524), Expect = 1e-56
Identities = 96/108 (88%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE P+LLTEAPL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL 112
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 215 bits (524), Expect = 1e-56
Identities = 96/108 (88%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEE P+LLTEAPL
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPL 112
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 210 bits (513), Expect = 3e-55
Identities = 91/108 (84%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 112
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 210 bits (513), Expect = 3e-55
Identities = 91/108 (84%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 112
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 210 bits (513), Expect = 3e-55
Identities = 91/108 (84%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEE PVLLTEAPL
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPL 112
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 202 bits (492), Expect = 1e-52
Identities = 86/108 (79%), Positives = 101/108 (93%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 284
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 285 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
GIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEE P+LLTEAPL
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPL 113
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 149 bits (362), Expect = 6e-37
Identities = 68/102 (66%), Positives = 79/102 (77%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 299
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 300 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAP 425
K P+EHGIV NWDDMEKIWH+TFYNELRV PEE PVLLTEAP
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAP 100
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 120 bits (290), Expect = 3e-28
Identities = 50/67 (74%), Positives = 61/67 (91%)
Frame = +3
Query: 228 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPV 407
MVGM + D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEE PV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 408 LLTEAPL 428
LLTEAPL
Sbjct: 61 LLTEAPL 67
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 111 bits (268), Expect = 1e-25
Identities = 49/105 (46%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 293
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 294 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
+ YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PL
Sbjct: 67 DINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPL 111
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 93.1 bits (221), Expect = 7e-20
Identities = 50/124 (40%), Positives = 73/124 (58%), Gaps = 16/124 (12%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 239
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 240 GQKDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLT 416
G++ Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P E P+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 417 EAPL 428
E PL
Sbjct: 125 EPPL 128
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 86.6 bits (205), Expect = 6e-18
Identities = 52/130 (40%), Positives = 73/130 (56%), Gaps = 22/130 (16%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 254
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 255 -----------YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE 398
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 399 QPVLLTEAPL 428
P+LL E PL
Sbjct: 125 HPMLLAEPPL 134
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 76.6 bits (180), Expect = 7e-15
Identities = 50/125 (40%), Positives = 67/125 (53%), Gaps = 21/125 (16%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 242
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 243 QKDSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLL 413
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+ LL
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 414 TEAPL 428
TE+PL
Sbjct: 125 TESPL 129
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.3 bits (142), Expect = 3e-10
Identities = 34/103 (33%), Positives = 52/103 (50%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 299
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 300 KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEQPVLLTEAPL 428
+ PI+ G + N D +IW H F + L +AP +LLTEAPL
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPL 104
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 46.4 bits (105), Expect = 8e-06
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 299
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 300 -----KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEQPVLLTE 419
+ P + +V ++ ME I + F + + P+L+TE
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITE 123
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 39.5 bits (88), Expect = 0.001
Identities = 32/89 (35%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 293
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 294 TLKYPIEHGIVTNWDDMEKIWHHTFYNEL 380
TL PIE G++ +WD ME + + Y L
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGL 81
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 32.3 bits (70), Expect = 0.14
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +1
Query: 112 LPRWS*TMGPECAKPVSRETTLPAPYFPRSWGDLVTRASWSAWVRRTPT 258
LP WS ++ P+C V + AP R+ T+ SW ++ TPT
Sbjct: 396 LPPWSVSILPDCKTEVYNTAKVNAPSVHRNMVPTGTKFSWGSFNEATPT 444
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.7 bits (66), Expect = 0.44
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = -3
Query: 241 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSS 104
P P + P RG +G T+ +SSPA+P + +P+ +ST + TS+
Sbjct: 290 PTPDIKPT-RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At4g24680.1 68417.m03533 expressed protein
Length = 1480
Score = 28.3 bits (60), Expect = 2.3
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +2
Query: 212 SSPGRHGRHGSEGLLRR**GTEQEGYPHTQIPHRTRHRHQLGRYGEDLA 358
S G + GS L R E TQ P++ +HQ GR+GED A
Sbjct: 477 SGQGGYDTPGSSVSLER---NESSHSQETQRPYKVLLKHQDGRFGEDNA 522
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 264 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 392
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 2.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 264 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 392
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At2g33280.1 68415.m04079 integral membrane transporter family
protein contains 9 transmembrane domains; contains Pfam
PF03092: BT1 family; contains TIGRFAMS TIGR00788:
folate/biopterin transporter
Length = 408
Score = 27.9 bits (59), Expect = 3.1
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = -2
Query: 350 LLHIVPVGDDAVFDGVFECEDTPLALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSV 171
LL + G A+F G E + +A L++ +G +T DALV +YG
Sbjct: 30 LLQGLAWGSLAIFPGAREVLPSLMAFILLSNLGASITEVSQDALV-------AEYGLRYQ 82
Query: 170 VSRETGFAHSGPIVYDQRGNFLVAHCEL 87
++ +A V GN L +C L
Sbjct: 83 INGLQSYALMASAVGGILGNLLGGYCLL 110
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/85 (21%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR-HQGVMVGMGQKDSYVGDEAQSK 281
++V ++V+NG+ K GF A ++ S+ + + G +++ V + + K
Sbjct: 386 KKVNKVLVENGTTTKKPGFTATSAKKSTSSSLSRKKNLSRSKKPANGVQEAGVNSDKRIK 445
Query: 282 RG--ILTLKYPIEHGIVTNWDDMEK 350
+G ++ ++ G+ T DD +K
Sbjct: 446 KGEKVIKCNITVDGGLKTGDDDRKK 470
>At1g45180.1 68414.m05180 zinc finger (C3HC4-type RING finger)
family protein similar to Pfam domain, PF00097: Zinc
finger, C3HC4 type (RING finger)
Length = 645
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +2
Query: 305 PHRTRHRHQLGRYGEDLASHLLQ*AACSSRGAASLAHRSSP 427
P++ H R E+ LL R A SLAH +SP
Sbjct: 404 PYQNNSLHNQRRLSENFRRSLLSSLVTQQRAARSLAHPASP 444
>At5g17960.1 68418.m02106 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 599
Score = 27.1 bits (57), Expect = 5.4
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -3
Query: 403 GCSSGATRSSL*-KV*CQIFSISSQLVTMPCSMGYLSVRIPLLLCASSPT*ESF 245
GC G T++ L C+ +SI + T+P + Y + PL LC T + +
Sbjct: 454 GCKRGLTKNRLQCSTLCE-YSICYECATIPSELHYKYDKHPLTLCYGEDTDDKY 506
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 196 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 98
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -3
Query: 196 EGNTARGASSPAKPALHIPDPLSTTNAATSSSH 98
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g23150.1 68416.m02918 ethylene receptor, putative (ETR2) similar
to putative ethylene receptor; ETR2 [Arabidopsis
thaliana] gi|3687654|gb|AAC62208.
Length = 773
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 278 ALCLITYVGVLLTHADHDALVTRSPHDRGKYGAGSVVSRETGF 150
A+ LIT + +LL + ++ + H+ G+ ++ +ETGF
Sbjct: 131 AITLITLIPLLLKVKVREFMLKKKAHELGREVGLILIKKETGF 173
>At2g44130.1 68415.m05489 kelch repeat-containing F-box family
protein very low similarity to SP|Q9ER30 Kelch-related
protein 1 (Sarcosin) {Rattus norvegicus}; contains Pfam
profiles PF01344: Kelch motif, PF00646: F-box domain
Length = 409
Score = 26.2 bits (55), Expect = 9.4
Identities = 14/58 (24%), Positives = 22/58 (37%)
Frame = +3
Query: 183 AVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIW 356
+V P GR QG VGMG + + +G I +W ++ +W
Sbjct: 230 SVTPMTEGRDECQGFAVGMGLRFCVLSGYGTESQGRFRSDGEIYDPATDSWSRIDNVW 287
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 230
E++ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,497,517
Number of Sequences: 28952
Number of extensions: 200903
Number of successful extensions: 528
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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