Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F11
(333 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26407| Best HMM Match : UQ_con (HMM E-Value=0) 49 1e-06
SB_33407| Best HMM Match : UQ_con (HMM E-Value=0) 48 3e-06
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05) 47 3e-06
SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07) 34 0.033
SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.044
SB_21476| Best HMM Match : Pkinase_C (HMM E-Value=0.001) 30 0.54
SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.71
SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.6
SB_16594| Best HMM Match : DUF1265 (HMM E-Value=2.6) 28 1.6
SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06) 27 2.9
SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.9
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 27 5.0
SB_15480| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.0
SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41) 27 5.0
SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62) 27 5.0
SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019) 27 5.0
SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39) 27 5.0
SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
SB_4099| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.8
>SB_26407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 1282
Score = 48.8 bits (111), Expect = 1e-06
Identities = 28/69 (40%), Positives = 35/69 (50%)
Frame = +1
Query: 16 MSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 195
+S + R LQ EL L +EP G TV+ S N W V + G PGTLY G F F
Sbjct: 1122 LSSAVRALQLELKKLTEEPVEGFTVEVPDES-NTFEWDVAIFGPPGTLYAGGYFKAHMSF 1180
Query: 196 TNKYPFDSP 222
+ YP+ P
Sbjct: 1181 PHDYPYSPP 1189
>SB_33407| Best HMM Match : UQ_con (HMM E-Value=0)
Length = 226
Score = 47.6 bits (108), Expect = 3e-06
Identities = 23/72 (31%), Positives = 37/72 (51%)
Frame = +1
Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
S + +R+Q+EL + +PPP + +L W + G PG++YEG F L F
Sbjct: 94 STAAKRIQRELTEITLDPPPNCSAGPK--GDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 151
Query: 199 NKYPFDSPESNI 234
+ YPF P+ +
Sbjct: 152 SDYPFKPPKGMV 163
>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
Length = 200
Score = 47.2 bits (107), Expect = 3e-06
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +1
Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
S + +R+Q+EL + +PPP + +L W + G PG++YEG F L F
Sbjct: 134 STAAKRIQRELTEITLDPPPNCSAGPK--GDDLYEWYSTILGPPGSVYEGGVFFLDIHFP 191
Query: 199 NKYPFDSPE 225
+ YPF P+
Sbjct: 192 SDYPFKPPK 200
>SB_33408| Best HMM Match : UQ_con (HMM E-Value=3.7e-07)
Length = 181
Score = 33.9 bits (74), Expect = 0.033
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 124 WTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPE 225
W + G PG++YEG F L F YPF P+
Sbjct: 54 WYSTILGPPGSVYEGGVFFLDIHFPTDYPFKPPK 87
>SB_41378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 473
Score = 33.5 bits (73), Expect = 0.044
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 58 LMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPESNIA 237
L K+P G + G ++L W + + G PGT YE F F +YP P
Sbjct: 344 LQKKPVEGFSA-GLFDDEDLYKWEIMVVGPPGTYYEEGYFKASMVFPKEYPQRPPTLTFI 402
Query: 238 SE 243
S+
Sbjct: 403 SD 404
>SB_21476| Best HMM Match : Pkinase_C (HMM E-Value=0.001)
Length = 257
Score = 29.9 bits (64), Expect = 0.54
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 136 MEGVPGTLYEGEKFVLQF--KFTNKYPFDSPESNIASE 243
M G + GE+ V QF KFT + P DSP+ ++ SE
Sbjct: 163 MAGDANPIKSGEEDVSQFDSKFTRQTPVDSPDDSMLSE 200
>SB_24794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 279
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 170 SPSYRVPGTPSICTVHNVRFWLARSPSTVTPGGGS 66
SPS+ PGTP+ T V F + +PS+ + G S
Sbjct: 42 SPSHTPPGTPTTPTTSTVSFLPSTTPSSSSQGTSS 76
>SB_30168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6863
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 10 AAMSPSERRLQKELMSLMKEPPPGVTVDGDLAS 108
+A SPS + Q++L +K PPPG V +S
Sbjct: 276 SARSPSPAKNQEKLSRRVKSPPPGSPVSSSSSS 308
>SB_16594| Best HMM Match : DUF1265 (HMM E-Value=2.6)
Length = 734
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 143 PSICTVHNVRFWLARSPSTVTPGGGSFIRDISSFCNLRSDGDIA 12
P+I +VH + F A S V PGGGS R + R +G A
Sbjct: 196 PAIASVHGLDFE-AEGASFVMPGGGSVSRHQCRHKDARGEGKCA 238
>SB_26761| Best HMM Match : UQ_con (HMM E-Value=1.7e-06)
Length = 739
Score = 27.5 bits (58), Expect = 2.9
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Frame = +1
Query: 37 LQKELMSLMKEPPPGVTV----DGDLASQNLT------LWTVHMEGVPGTLYEGEKFVLQ 186
L+KELM L P G+ V D + + LT ++ V +EG GT Y+ F
Sbjct: 597 LRKELMLLQSSLPEGILVRGYEDRMVTTVRLTVRPDHDIFRVMIEGPAGTPYDHGLFAFD 656
Query: 187 FKFTNKYPFDSPES 228
YP D+P S
Sbjct: 657 ILLPANYP-DAPPS 669
>SB_30411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 710
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 115 LTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSP 222
L + V G GT YEG + ++ KYPF SP
Sbjct: 47 LNEFIVKFFGPVGTPYEGGVWKVRVDLPEKYPFKSP 82
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 26.6 bits (56), Expect = 5.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVDG 96
+L E + ++ PPPGV VDG
Sbjct: 311 KLGSEYLDVISGPPPGVKVDG 331
>SB_15480| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 276
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVD 93
A SP RRL K +SL+ EP P TVD
Sbjct: 168 ARSPRGRRLIK--ISLLTEPEPDTTVD 192
>SB_50551| Best HMM Match : Extensin_2 (HMM E-Value=0.41)
Length = 376
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVD 93
A SP RRL K +SL+ EP P TVD
Sbjct: 185 ARSPRGRRLIK--ISLLTEPEPDTTVD 209
>SB_37346| Best HMM Match : Extensin_2 (HMM E-Value=0.62)
Length = 331
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVD 93
A SP RRL K +SL+ EP P TVD
Sbjct: 22 ARSPRGRRLIK--ISLLTEPEPDTTVD 46
>SB_20395| Best HMM Match : Extensin_2 (HMM E-Value=0.019)
Length = 348
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVD 93
A SP RRL K +SL+ EP P TVD
Sbjct: 179 ARSPRGRRLIK--ISLLTEPEPDTTVD 203
>SB_9528| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-39)
Length = 841
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +1
Query: 97 DLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPE 225
+L + T + G P T +EG + L YPF+ P+
Sbjct: 680 ELVDETFTKLKGEIRGPPETPFEGGTYNLDIVIPETYPFNPPK 722
>SB_44045| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 7 GAAMSPSERRLQKELMSLMKEPPPGVTVDGDLAS 108
G++ S S RR + + PP G+T D +AS
Sbjct: 7 GSSKSSSSRRRRPREQEIFIGPPTGMTSDSSVAS 40
>SB_6699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1087
Score = 25.8 bits (54), Expect = 8.8
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 7 GAAMSPSERRLQKELMSLMKEPPPGVTVDGDLAS 108
G++ S S RR + + PP G+T D +AS
Sbjct: 1017 GSSKSSSSRRRRPREQEIFIGPPTGMTSDSSVAS 1050
>SB_4099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 181 LQFKFTNKYPFDSPESNIASEE 246
LQF F KYP ++P + S E
Sbjct: 5 LQFTFVEKYPDEAPVVEVTSSE 26
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,096,849
Number of Sequences: 59808
Number of extensions: 217007
Number of successful extensions: 518
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 516
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 475580678
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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