Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F11
(333 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 72 9e-14
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 54 3e-08
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 47 3e-06
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 47 3e-06
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 42 1e-04
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 42 1e-04
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 41 2e-04
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 38 0.001
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 38 0.002
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 38 0.002
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 36 0.005
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 32 0.087
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 29 0.81
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 29 1.1
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 28 1.4
Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical pr... 28 1.9
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 28 1.9
Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical pr... 27 2.5
Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical pr... 27 2.5
U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical pr... 26 5.7
Z92797-4|CAB07238.3| 478|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z92797-3|CAB07237.2| 445|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z83118-3|CAB05577.3| 478|Caenorhabditis elegans Hypothetical pr... 26 7.5
Z83118-2|CAB05576.2| 445|Caenorhabditis elegans Hypothetical pr... 26 7.5
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 26 7.5
Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical pr... 25 10.0
CU457741-14|CAM36355.1| 119|Caenorhabditis elegans Hypothetical... 25 10.0
AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral signa... 25 10.0
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 72.1 bits (169), Expect = 9e-14
Identities = 35/73 (47%), Positives = 42/73 (57%)
Frame = +1
Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
RRL KEL L E P G+ VD S +L W + + G GTLY GE F+LQF F +YP
Sbjct: 7 RRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYP 66
Query: 211 FDSPESNIASEEI 249
F+SPE E I
Sbjct: 67 FNSPEVMFVGETI 79
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 53.6 bits (123), Expect = 3e-08
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +1
Query: 1 ARGAAMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFV 180
++ + S + R L EL +L +P G T+D + NL +WTV + G P TLY+G F
Sbjct: 3 SKASTSSGALRALTMELKNLQSQPVEGFTID--VNEDNLFVWTVGIYGPPKTLYQGGYFK 60
Query: 181 LQFKFTNKYPFDSPESNIASE 243
+F + YP+ P ++
Sbjct: 61 ASIRFPSNYPYSPPSMKFTTK 81
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 47.2 bits (107), Expect = 3e-06
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +1
Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
+PS RRL ++ L ++PP GV+ G N+ W + G T +E F L +FT
Sbjct: 3 TPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 199 NKYPFDSPESNIASEEIYYN 258
+YP P S+ + N
Sbjct: 61 EEYPNKPPTVKFISKMFHPN 80
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 47.2 bits (107), Expect = 3e-06
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = +1
Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
+PS RRL ++ L ++PP GV+ G N+ W + G T +E F L +FT
Sbjct: 3 TPSRRRLMRDFKKLQEDPPAGVS--GAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFT 60
Query: 199 NKYPFDSPESNIASEEIYYN 258
+YP P S+ + N
Sbjct: 61 EEYPNKPPTVKFISKMFHPN 80
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
+R+QKEL L ++PP + +L W + G P + Y+G F L F YP
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGP--VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 211 FDSPESNIASEEIYYNKIDT 270
F P+ + IY+ I++
Sbjct: 62 FKPPKVAFTT-RIYHPNINS 80
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/80 (30%), Positives = 38/80 (47%)
Frame = +1
Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
+R+QKEL L ++PP + +L W + G P + Y+G F L F YP
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGP--VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYP 61
Query: 211 FDSPESNIASEEIYYNKIDT 270
F P+ + IY+ I++
Sbjct: 62 FKPPKVAFTT-RIYHPNINS 80
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 41.1 bits (92), Expect = 2e-04
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +1
Query: 16 MSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 195
M S L+K+L + + P G + G + ++ W V + G P TLYEG F F
Sbjct: 1 MEQSSLLLKKQLADMRRVPVDGFSA-GLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDF 59
Query: 196 TNKYPFDSPESNIASEEIYYNKID 267
YP P+ S EI++ ID
Sbjct: 60 PRDYPQKPPKMKFIS-EIWHPNID 82
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 38.3 bits (85), Expect = 0.001
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +1
Query: 1 ARGAAMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFV 180
A G A S + RRLQK+ LM++P G+ + N+ W + G P T + G +
Sbjct: 12 AAGTASSSAVRRLQKDYAKLMQDPVDGIKALPN--EDNILEWHYCLRGSPDTPFYGGYYW 69
Query: 181 LQFKFTNKYPFDSP 222
+ F +P+ P
Sbjct: 70 GKVIFKENFPWSPP 83
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 37.9 bits (84), Expect = 0.002
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVT-VDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
RLQ+E ++ T + ++ ++NLT H+ G P T Y G F L K ++YP
Sbjct: 8 RLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYP 67
Query: 211 FDSPESNIASE 243
F P +++
Sbjct: 68 FSPPNVKFSTK 78
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/79 (27%), Positives = 39/79 (49%)
Frame = +1
Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
RR+ KE L+ +P PG++ + D N + V + G + + G F L+ +YP
Sbjct: 7 RRIIKETQRLLADPVPGISANPD--ESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYP 64
Query: 211 FDSPESNIASEEIYYNKID 267
+P+ + +IY+ ID
Sbjct: 65 MAAPKVRFMT-KIYHPNID 82
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 36.3 bits (80), Expect = 0.005
Identities = 20/64 (31%), Positives = 31/64 (48%)
Frame = +1
Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
+RL+K+ L+KEP P + N+ W + G P T YEG ++ + F +P
Sbjct: 11 QRLKKDYQRLLKEPVPFMKAAP--LETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFP 68
Query: 211 FDSP 222
F P
Sbjct: 69 FKPP 72
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 32.3 bits (70), Expect = 0.087
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
Frame = +1
Query: 22 PSERRLQKELMSLMKEPPPGVTVDG--DLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 195
P RL +EL K G G D + LT WT + G P T YE + LQ +
Sbjct: 5 PRNFRLLEELEEGQKGKGDGNISWGLEDDSDMTLTRWTASIIGPPRTPYESRIYNLQIQC 64
Query: 196 TNKYPFDSP 222
YP + P
Sbjct: 65 GGNYPREPP 73
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 29.1 bits (62), Expect = 0.81
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 136 MEGVPGTLYEGEKFVLQFKFTNKYPFDSP 222
++GV T YEG F L K YPF +P
Sbjct: 385 IKGVEETPYEGGIFELDIKIGESYPFKAP 413
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 28.7 bits (61), Expect = 1.1
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVL 183
+R+QKEL L ++PP + +L W + G P + Y+G F L
Sbjct: 4 KRIQKELHDLGRDPPAQCSTGS--VGDDLYHWQATIMGPPESPYQGGIFFL 52
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 28.3 bits (60), Expect = 1.4
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 130 VHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPESNIASEEIYYNKIDTA 273
V G T YE + ++ +KYPF SP + +I++ ID A
Sbjct: 37 VRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLN-KIFHPNIDEA 83
>Z81513-6|CAB04176.1| 341|Caenorhabditis elegans Hypothetical
protein F26D2.7 protein.
Length = 341
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = -1
Query: 324 TVHQPAMSYISTKIILLCSIYFVVIYF-LASYIRLR-*IKWVLVCEFKLEHKFF 169
T+ A+S + + IL+C YF+ ++F L Y ++ +K C+ K + + F
Sbjct: 190 TIQWKALSLLISAGILICFQYFIFVFFGLKIYFNMKLRLKSFSACQEKFQSQLF 243
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 27.9 bits (59), Expect = 1.9
Identities = 20/64 (31%), Positives = 25/64 (39%)
Frame = +1
Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
RRL KE M L + P NL W + G GT +EG + + F YP
Sbjct: 13 RRLMKEAMELRQ---PTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYP 69
Query: 211 FDSP 222
P
Sbjct: 70 MKPP 73
>Z30215-9|CAB54247.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ Q +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 863 KYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 920
>Z30215-8|CAA82941.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ Q +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 866 KYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 923
>Z29121-4|CAB54514.1| 1037|Caenorhabditis elegans Hypothetical protein
ZK757.3b protein.
Length = 1037
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ Q +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 863 KYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 920
>Z29121-3|CAA82389.1| 1040|Caenorhabditis elegans Hypothetical protein
ZK757.3a protein.
Length = 1040
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ Q +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 866 KYQNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 923
>U28971-2|AAA68377.1| 180|Caenorhabditis elegans Hypothetical
protein B0244.9 protein.
Length = 180
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 92 MEIWLAKI*HYGQYIWKEYRALYM 163
+ +W+A HY +IW + LYM
Sbjct: 65 LSLWIAST-HYSYFIWLVFATLYM 87
>Z92797-4|CAB07238.3| 478|Caenorhabditis elegans Hypothetical
protein H25P06.2b protein.
Length = 478
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 112 NLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPES 228
N+ LW+ L +G+ +L K N FD+P+S
Sbjct: 328 NMPLWSAMSSEPNSALPQGKYRILPNKMKNLMKFDAPDS 366
>Z92797-3|CAB07237.2| 445|Caenorhabditis elegans Hypothetical
protein H25P06.2a protein.
Length = 445
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 112 NLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPES 228
N+ LW+ L +G+ +L K N FD+P+S
Sbjct: 328 NMPLWSAMSSEPNSALPQGKYRILPNKMKNLMKFDAPDS 366
>Z83118-3|CAB05577.3| 478|Caenorhabditis elegans Hypothetical
protein H25P06.2b protein.
Length = 478
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 112 NLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPES 228
N+ LW+ L +G+ +L K N FD+P+S
Sbjct: 328 NMPLWSAMSSEPNSALPQGKYRILPNKMKNLMKFDAPDS 366
>Z83118-2|CAB05576.2| 445|Caenorhabditis elegans Hypothetical
protein H25P06.2a protein.
Length = 445
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +1
Query: 112 NLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPES 228
N+ LW+ L +G+ +L K N FD+P+S
Sbjct: 328 NMPLWSAMSSEPNSALPQGKYRILPNKMKNLMKFDAPDS 366
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 25.8 bits (54), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 136 MEGVPGTLYEGEKFVLQFKFTNKYPFDSPE 225
++G GT Y G F ++ YPF+ P+
Sbjct: 57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPK 86
>Z68750-6|CAA92970.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 25.4 bits (53), Expect = 10.0
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 861 KFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 918
>Z68750-5|CAA92969.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 25.4 bits (53), Expect = 10.0
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 858 KFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 915
>Z68300-4|CAA92619.1| 1035|Caenorhabditis elegans Hypothetical protein
T22B3.2b protein.
Length = 1035
Score = 25.4 bits (53), Expect = 10.0
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 861 KFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 918
>Z68300-3|CAA92618.1| 1032|Caenorhabditis elegans Hypothetical protein
T22B3.2a protein.
Length = 1032
Score = 25.4 bits (53), Expect = 10.0
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = +1
Query: 34 RLQKELMSLMKEPPPGVTVD-GDLASQNLTLWTVHMEGVPGTLYEGEKFVL--QFKFT 198
+ +++ K PPG TVD G ++ + + GV GT VL + KFT
Sbjct: 858 KFPNDMVGKAKNVPPGTTVDTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFT 915
>CU457741-14|CAM36355.1| 119|Caenorhabditis elegans Hypothetical
protein C42C1.12 protein.
Length = 119
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +1
Query: 46 ELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPG 153
+L L K P PG T G N L + + GV G
Sbjct: 17 KLFGLFKNPDPGFTQTGISMFTNFVLTNMFVYGVTG 52
>AF099001-6|AAC68738.2| 661|Caenorhabditis elegans Lateral
signaling target protein 2 protein.
Length = 661
Score = 25.4 bits (53), Expect = 10.0
Identities = 16/59 (27%), Positives = 24/59 (40%)
Frame = -2
Query: 182 STNFSPSYRVPGTPSICTVHNVRFWLARSPSTVTPGGGSFIRDISSFCNLRSDGDIAAP 6
ST +R T +N R W+ PS T S ++D SS + +A+P
Sbjct: 300 STLTMSDFRTNATDEEKAKNNQRVWMCDMPSDSTSSLDSSVQDSSSETTSLASSALASP 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,281,931
Number of Sequences: 27780
Number of extensions: 171906
Number of successful extensions: 528
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 523
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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