Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F11
         (333 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    23   1.3  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    23   1.3  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    23   1.3  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    23   1.3  
AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex det...    23   1.3  
AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex det...    23   1.3  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.2  

>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 NKYPFDSPESNIASEEIYYNK 261
           N +PFD P  + A E I Y +
Sbjct: 191 NIFPFDDPLCSFAIESISYEQ 211


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 NKYPFDSPESNIASEEIYYNK 261
           N +PFD P  + A E I Y +
Sbjct: 191 NIFPFDDPLCSFAIESISYEQ 211


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 NKYPFDSPESNIASEEIYYNK 261
           N +PFD P  + A E I Y +
Sbjct: 242 NIFPFDDPLCSFAIESISYEQ 262


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 199 NKYPFDSPESNIASEEIYYNK 261
           N +PFD P  + A E I Y +
Sbjct: 191 NIFPFDDPLCSFAIESISYEQ 211


>AY569717-1|AAS86670.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 196 TNKYPFDSPESNIASEEIYYNKID 267
           +N Y + +  +N  S+++YYN I+
Sbjct: 306 SNNYNYKNYNNNYNSKKLYYNIIN 329


>AY569712-1|AAS86665.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +1

Query: 196 TNKYPFDSPESNIASEEIYYNKID 267
           +N Y + +  +N  S+++YYN I+
Sbjct: 317 SNNYNYKNYNNNYNSKKLYYNIIN 340


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 226 SNIASEEIYYNKIDTA*QND 285
           +++   EI+Y KI+T+  +D
Sbjct: 569 NDLEPSEIFYEKIETSLNSD 588


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +1

Query: 226 SNIASEEIYYNKIDTA*QND 285
           +++   EI+Y KI+T+  +D
Sbjct: 569 NDLEPSEIFYEKIETSLNSD 588


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,808
Number of Sequences: 438
Number of extensions: 2182
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)