SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F11
         (333 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)...    57   3e-09
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)...    55   1e-08
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)...    53   5e-08
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id...    52   7e-08
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)...    52   7e-08
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)...    50   5e-07
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)...    47   3e-06
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)...    47   3e-06
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ...    46   5e-06
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E...    45   1e-05
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E...    45   1e-05
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E...    45   1e-05
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)...    45   1e-05
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ...    43   4e-05
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)...    42   8e-05
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ...    42   8e-05
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ...    42   8e-05
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro...    41   2e-04
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E...    40   5e-04
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ...    38   0.001
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ...    38   0.002
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ...    38   0.002
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ...    38   0.002
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ...    37   0.003
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E...    37   0.003
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E...    37   0.003
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E...    37   0.003
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ...    37   0.003
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ...    37   0.003
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)...    37   0.004
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)...    37   0.004
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ...    37   0.004
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ...    36   0.007
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ...    36   0.009
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ...    36   0.009
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E...    36   0.009
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ...    35   0.012
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ...    34   0.027
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E...    32   0.083
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E...    32   0.083
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E...    32   0.11 
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro...    28   1.4  
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc...    26   5.5  
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro...    26   7.2  
At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa...    26   7.2  
At4g09760.3 68417.m01604 choline kinase, putative similar to GmC...    25   9.5  
At4g09760.2 68417.m01603 choline kinase, putative similar to GmC...    25   9.5  
At4g09760.1 68417.m01602 choline kinase, putative similar to GmC...    25   9.5  
At1g35140.1 68414.m04356 phosphate-responsive protein, putative ...    25   9.5  

>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
           E2; identical to gi:2801446
          Length = 161

 Score = 57.2 bits (132), Expect = 3e-09
 Identities = 27/64 (42%), Positives = 34/64 (53%)
 Frame = +1

Query: 34  RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213
           RLQKE M     PP G        S NL  W + + GVPGTLY  E + LQ +F   YP 
Sbjct: 19  RLQKEFMEWQTNPPSGFK---HRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPM 75

Query: 214 DSPE 225
           ++P+
Sbjct: 76  EAPQ 79


>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
           E2; identical to ubiquitin-conjugating enzyme 15
           GI:2801442 from [Arabidopsis thaliana]
          Length = 161

 Score = 54.8 bits (126), Expect = 1e-08
 Identities = 26/64 (40%), Positives = 34/64 (53%)
 Frame = +1

Query: 34  RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213
           RLQKEL      PP G        + NL  WT+ + G PGTLY  E + LQ +F   YP 
Sbjct: 19  RLQKELSEWQLNPPTGFR---HKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPM 75

Query: 214 DSPE 225
           ++P+
Sbjct: 76  EAPQ 79


>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
           E2; identical to gi:2801448
          Length = 161

 Score = 52.8 bits (121), Expect = 5e-08
 Identities = 25/64 (39%), Positives = 33/64 (51%)
 Frame = +1

Query: 34  RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213
           RLQKEL      PP G        + NL  W + + G PGTLY  E + LQ +F   YP 
Sbjct: 19  RLQKELSEWQVNPPTGFK---HRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPM 75

Query: 214 DSPE 225
           ++P+
Sbjct: 76  EAPQ 79


>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
           identical to ubiquitin-conjugating enzyme COP10
           [Arabidopsis thaliana] GI:20065779; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 182

 Score = 52.4 bits (120), Expect = 7e-08
 Identities = 30/87 (34%), Positives = 44/87 (50%)
 Frame = +1

Query: 13  AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192
           ++S S +R+Q+E+  L  +PPP  +        NL  W   + G  GT YEG  F L   
Sbjct: 33  SVSASGKRIQREMAELNIDPPPDCSAGPK--GDNLYHWIATIIGPSGTPYEGGIFFLDII 90

Query: 193 FTNKYPFDSPESNIASEEIYYNKIDTA 273
           F + YPF  P+  +    IY+  +DTA
Sbjct: 91  FPSDYPFKPPKL-VFKTRIYHCNVDTA 116


>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
           E2; identical to gi:2801444, GB:AAC39325 from
           [Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
           (1993))
          Length = 161

 Score = 52.4 bits (120), Expect = 7e-08
 Identities = 25/64 (39%), Positives = 33/64 (51%)
 Frame = +1

Query: 34  RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213
           RLQKEL+     PP G        + NL  W + + G PGTLY  + + LQ  F   YP 
Sbjct: 19  RLQKELVEWQMNPPTGFK---HKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPM 75

Query: 214 DSPE 225
           +SP+
Sbjct: 76  ESPQ 79


>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
           nearly identical to ubiquitin-conjugating enzyme UBC19
           [Arabidopsis thaliana] GI:22530865; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 181

 Score = 49.6 bits (113), Expect = 5e-07
 Identities = 24/65 (36%), Positives = 36/65 (55%)
 Frame = +1

Query: 31  RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           +RLQ ELM LM    PG++   +    N+  W   + G   T++EG ++ L   F+N YP
Sbjct: 39  KRLQSELMGLMMGADPGISAFPE--EDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYP 96

Query: 211 FDSPE 225
           F SP+
Sbjct: 97  FKSPK 101


>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
           E2; UbcAT3; identical to gi:2129757, S46656
          Length = 167

 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 26/69 (37%), Positives = 34/69 (49%)
 Frame = +1

Query: 37  LQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFD 216
           LQK+L  L K+P  G +  G +  +N+  W+V + G P TLYEG  F     F   YP  
Sbjct: 10  LQKQLKDLCKKPVDGFSA-GLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVS 68

Query: 217 SPESNIASE 243
            P     SE
Sbjct: 69  PPTVTFTSE 77


>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
           nearly identical to ubiquitin-conjugating enzyme UBC20
           [Arabidopsis thaliana] GI:22530867; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 180

 Score = 47.2 bits (107), Expect = 3e-06
 Identities = 23/65 (35%), Positives = 35/65 (53%)
 Frame = +1

Query: 31  RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           +RLQ ELM LM    PG++   +    N+  W   + G   T++EG ++ L   F+N YP
Sbjct: 38  KRLQSELMGLMMGGGPGISAFPE--EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYP 95

Query: 211 FDSPE 225
           F  P+
Sbjct: 96  FKPPK 100


>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
           strong similar to ubiquitin-conjugating enzymes E2-17
           from [Arabidopsis thaliana] SP|P35134, SP|P35132,
           SP|P35133; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 149

 Score = 46.4 bits (105), Expect = 5e-06
 Identities = 21/82 (25%), Positives = 43/82 (52%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ +EL  + + PP   +  G +A +++  W   + G   + Y G  F +   F++ 
Sbjct: 2   ASKRISRELRDMQRHPPANCSA-GPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60

Query: 205 YPFDSPESNIASEEIYYNKIDT 270
           YPF  P+ N  + ++Y+  ID+
Sbjct: 61  YPFKPPKVNFKT-KVYHPNIDS 81


>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
           identical to gi:2689242, SP:P42745
          Length = 152

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 22/80 (27%), Positives = 38/80 (47%)
 Frame = +1

Query: 19  SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
           +P+ +RL ++   L ++PP G++  G     N+ LW   + G   T ++G  F L  +F+
Sbjct: 3   TPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 199 NKYPFDSPESNIASEEIYYN 258
             YP   P     S   + N
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80


>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
           identical to gi:431259, SP:P25865
          Length = 152

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 22/80 (27%), Positives = 38/80 (47%)
 Frame = +1

Query: 19  SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
           +P+ +RL ++   L ++PP G++  G     N+ LW   + G   T ++G  F L  +F+
Sbjct: 3   TPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 199 NKYPFDSPESNIASEEIYYN 258
             YP   P     S   + N
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80


>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
           identical to gi:431259, SP:P25865
          Length = 152

 Score = 45.2 bits (102), Expect = 1e-05
 Identities = 22/80 (27%), Positives = 38/80 (47%)
 Frame = +1

Query: 19  SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
           +P+ +RL ++   L ++PP G++  G     N+ LW   + G   T ++G  F L  +F+
Sbjct: 3   TPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60

Query: 199 NKYPFDSPESNIASEEIYYN 258
             YP   P     S   + N
Sbjct: 61  EDYPNKPPTVRFVSRMFHPN 80


>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
           E2; identical to gi:992706
          Length = 166

 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 25/69 (36%), Positives = 33/69 (47%)
 Frame = +1

Query: 37  LQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFD 216
           LQK+L  L K P  G +  G +  +N+  W+V + G P TLYEG  F     F   YP  
Sbjct: 9   LQKQLKDLCKHPVDGFSA-GLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNS 67

Query: 217 SPESNIASE 243
            P     S+
Sbjct: 68  PPTVRFTSD 76


>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
           nearly identical to ubiquitin-conjugating enzyme E2
           [Catharanthus roseus] GI:5381319; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 153

 Score = 43.2 bits (97), Expect = 4e-05
 Identities = 26/85 (30%), Positives = 43/85 (50%)
 Frame = +1

Query: 13  AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192
           A S   RR+ KE   L+ EP PG++     + +N+  + V + G   + YEG  F L+  
Sbjct: 2   ANSNLPRRIIKETQRLLSEPAPGISASP--SEENMRYFNVMILGPTQSPYEGGVFKLELF 59

Query: 193 FTNKYPFDSPESNIASEEIYYNKID 267
              +YP  +P+    + +IY+  ID
Sbjct: 60  LPEEYPMAAPKVRFLT-KIYHPNID 83


>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
           E2; identical to gi:12643427, SP:P35134
          Length = 148

 Score = 42.3 bits (95), Expect = 8e-05
 Identities = 23/82 (28%), Positives = 44/82 (53%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G P + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPSNCSA-GPVA-EDMFHWQATIMGPPESPYAGGVFLVSIHFPPD 59

Query: 205 YPFDSPESNIASEEIYYNKIDT 270
           YPF  P+ +  + ++Y+  I++
Sbjct: 60  YPFKPPKVSFKT-KVYHPNINS 80


>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
           nearly identical to ubiquitin-conjugating enzyme E2
           [Catharanthus roseus] GI:5381319; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 153

 Score = 42.3 bits (95), Expect = 8e-05
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +1

Query: 13  AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192
           A S   RR+ KE   L+ EP PG++     +  N+  + V + G   + YEG  F L+  
Sbjct: 2   ANSNLPRRIIKETQRLLSEPAPGISASP--SEDNMRYFNVMILGPTQSPYEGGVFKLELF 59

Query: 193 FTNKYPFDSPESNIASEEIYYNKID 267
              +YP  +P+    + +IY+  ID
Sbjct: 60  LPEEYPMAAPKVRFLT-KIYHPNID 83


>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
           nearly identical to ubiquitin-conjugating enzyme E2
           [Catharanthus roseus] GI:5381319; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 112

 Score = 42.3 bits (95), Expect = 8e-05
 Identities = 26/85 (30%), Positives = 42/85 (49%)
 Frame = +1

Query: 13  AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192
           A S   RR+ KE   L+ EP PG++     +  N+  + V + G   + YEG  F L+  
Sbjct: 2   ANSNLPRRIIKETQRLLSEPAPGISASP--SEDNMRYFNVMILGPTQSPYEGGVFKLELF 59

Query: 193 FTNKYPFDSPESNIASEEIYYNKID 267
              +YP  +P+    + +IY+  ID
Sbjct: 60  LPEEYPMAAPKVRFLT-KIYHPNID 83


>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
           protein similar to  Ubiquitin-conjugating enzyme E2-16
           kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
           carrier protein) from {Schizosaccharomyces pombe}
           SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
           Pfam profile PF00179: Ubiquitin-conjugating enzyme
          Length = 154

 Score = 40.7 bits (91), Expect = 2e-04
 Identities = 21/54 (38%), Positives = 27/54 (50%)
 Frame = +1

Query: 106 SQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPESNIASEEIYYNKID 267
           S N+  WT  + G  GT YEG  F L  KF   YPF  P+    +  IY+  I+
Sbjct: 33  SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKT-PIYHPNIN 85


>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 149

 Score = 39.5 bits (88), Expect = 5e-04
 Identities = 20/67 (29%), Positives = 33/67 (49%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP      G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCIFAGPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 61  YPFKPPK 67


>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
           similar to Ubiquitin-conjugating enzyme E2
           (Ubiquitin-protein ligase) (Ubiquitin carrier protein)
           from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
           pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 409

 Score = 38.3 bits (85), Expect = 0.001
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
 Frame = +1

Query: 34  RLQKELMSLMKEPPPGVTVDGDLASQN-----LTLWTV--HMEGVPGTLYEGEKFVLQFK 192
           R+QKEL  L+ +PP G +     ++ N      T  T+   +EG   T+Y    F L+ +
Sbjct: 10  RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69

Query: 193 FTNKYPFDSPESNIASEEIYYNKIDTA 273
              +YPF  P  + A+  IY+  ID +
Sbjct: 70  IPERYPFQPPIVSFAT-PIYHPNIDNS 95


>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
           (UBC9) E2; identical to gi:297883, SP:P35132; identical
           to cDNA UBC9 for ubiquitin conjugating enzyme homolog
           GI:297883
          Length = 178

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 32  ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 89

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 90  YPFKPPK 96


>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
           (UBC9) E2; identical to gi:297883, SP:P35132; identical
           to cDNA UBC9 for ubiquitin conjugating enzyme homolog
           GI:297883
          Length = 148

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 59

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 60  YPFKPPK 66


>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
           identical or nearly so to Ubiquitin-conjugating enzymes
           SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
           thaliana}; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 37.5 bits (83), Expect = 0.002
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 59

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 60  YPFKPPK 66


>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
           similar to ubiquitin conjugating enzyme 6 from [Homo
           sapiens] GI:14029267, [Mus musculus] GI:14029263;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 243

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = +1

Query: 31  RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           +RLQKE  +L KEP   V      +  ++  W   +EG  GT + G  +  + KF  +YP
Sbjct: 8   KRLQKEYRALCKEPVSHVVARP--SPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65

Query: 211 FDSP 222
           +  P
Sbjct: 66  YKPP 69


>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 145

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 60  YPFKPPK 66


>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 148

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 60  YPFKPPK 66


>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
           identical to gi:297882, SP:P35131
          Length = 148

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 60  YPFKPPK 66


>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
           similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
           kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
           carrier protein) {Pichia angusta}; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 157

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 22/81 (27%), Positives = 32/81 (39%)
 Frame = +1

Query: 16  MSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 195
           M  S  RL KE   + +E      +       N+  WT  ++G   T YEG  F L F  
Sbjct: 1   MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60

Query: 196 TNKYPFDSPESNIASEEIYYN 258
              YP   P+    ++  + N
Sbjct: 61  PEPYPLQPPQVRFLTKIFHPN 81


>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
           similar to ubiquitin conjugating enzyme 6 from [Homo
           sapiens] GI:14029267, [Mus musculus] GI:14029263;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 237

 Score = 37.1 bits (82), Expect = 0.003
 Identities = 21/64 (32%), Positives = 32/64 (50%)
 Frame = +1

Query: 31  RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           +RLQKE  +L KEP   V      +  ++  W   +EG  GT + G  +  + KF  +YP
Sbjct: 8   KRLQKEYRALCKEPVSHVVARP--SPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65

Query: 211 FDSP 222
           +  P
Sbjct: 66  YKPP 69


>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
           E2; identical to gi:297877, SP:P35133
          Length = 148

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSESPYAGGVFLVTIHFPPD 59

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 60  YPFKPPK 66


>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
           E2; identical to gi:297877, SP:P35133
          Length = 148

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 20/67 (29%), Positives = 34/67 (50%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L K+PP   +  G +A +++  W   + G   + Y G  F++   F   
Sbjct: 2   ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSESPYAGGVFLVTIHFPPD 59

Query: 205 YPFDSPE 225
           YPF  P+
Sbjct: 60  YPFKPPK 66


>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
           strong similarity to SP|P35133 Ubiquitin-conjugating
           enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
           ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
           thaliana}; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 36.7 bits (81), Expect = 0.004
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +1

Query: 31  RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           RR+ KEL  L ++PP  V+       +++  W   + G   + Y G  F++   F   YP
Sbjct: 4   RRILKELKELQRDPP--VSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61

Query: 211 FDSPE 225
           F  P+
Sbjct: 62  FKPPK 66


>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
           strong similarity to ubiquitin conjugating enzyme
           [Lycopersicon esculentum] GI:886679; contains Pfam
           profile PF00179: Ubiquitin-conjugating enzyme
          Length = 192

 Score = 35.9 bits (79), Expect = 0.007
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = +1

Query: 34  RLQKELMSLMK-EPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           R+QKEL    + +   G+ V     S NLT  T  + G  GT YEG  F +     + YP
Sbjct: 6   RIQKELQDCERNQDSSGIRVCPK--SDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYP 63

Query: 211 FDSPESNIASE 243
           F+ P+   +++
Sbjct: 64  FEPPKMQFSTK 74


>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
           strong similarity to ubiquitin-conjugating enzyme UBC2
           [Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
           sativum] GI:456568; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 35.5 bits (78), Expect = 0.009
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L ++PP  V+        ++  W   + G   + + G  F++   F   
Sbjct: 2   ASKRINKELRDLQRDPP--VSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPD 59

Query: 205 YPFDSPESNIASEEIYYNKIDT 270
           YPF  P+    + ++Y+  I++
Sbjct: 60  YPFKPPKVAFRT-KVYHPNINS 80


>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
           strong similarity to ubiquitin-conjugating enzyme UBC2
           [Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
           sativum] GI:456568; contains Pfam profile PF00179:
           Ubiquitin-conjugating enzyme
          Length = 148

 Score = 35.5 bits (78), Expect = 0.009
 Identities = 19/82 (23%), Positives = 39/82 (47%)
 Frame = +1

Query: 25  SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           + +R+ KEL  L ++PP  V+        ++  W   + G   + + G  F++   F   
Sbjct: 2   ASKRINKELRDLQRDPP--VSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPD 59

Query: 205 YPFDSPESNIASEEIYYNKIDT 270
           YPF  P+    + ++Y+  I++
Sbjct: 60  YPFKPPKVAFRT-KVYHPNINS 80


>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
           identical to gi|431267, SP:P42750, PIR:S52661; contains
           a ubiquitin-conjugating enzymes active site (PDOC00163)
          Length = 183

 Score = 35.5 bits (78), Expect = 0.009
 Identities = 24/83 (28%), Positives = 42/83 (50%)
 Frame = +1

Query: 19  SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
           SPS+RR + ++M LM       TV+ DL      ++ V   G   +LY+G  + ++ +  
Sbjct: 3   SPSKRR-EMDMMKLMMSDYKVDTVNDDLQ-----MFYVTFHGPTDSLYQGGVWKIKVELP 56

Query: 199 NKYPFDSPESNIASEEIYYNKID 267
             YP+ SP     + +IY+  +D
Sbjct: 57  EAYPYKSPSVGFVN-KIYHPNVD 78


>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
           similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
           kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
           carrier protein) {Homo sapiens}; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 251

 Score = 35.1 bits (77), Expect = 0.012
 Identities = 20/76 (26%), Positives = 38/76 (50%)
 Frame = +1

Query: 31  RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           ++L KEL SL + PP G+ V   +  ++ +     +EG  GT YE   F ++   ++ +P
Sbjct: 13  KQLAKELKSLDESPPDGIKV--VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFP 70

Query: 211 FDSPESNIASEEIYYN 258
              P+    ++  + N
Sbjct: 71  HSPPKGYFMTKIFHPN 86


>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
           strong similarity to SP|P50550 Ubiquitin-like protein
           SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
           ligase) (Ubiquitin carrier protein)
           (Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 160

 Score = 33.9 bits (74), Expect = 0.027
 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
 Frame = +1

Query: 34  RLQKELMSLMKEPPPGVTVD---GDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204
           RL +E  S  K  P G       G   + NL +W   + G  GT +EG  F L   F+  
Sbjct: 9   RLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSED 68

Query: 205 YPFDSPE 225
           YP   P+
Sbjct: 69  YPSKPPK 75


>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
           identical to gi:992703, SP:P42747
          Length = 198

 Score = 32.3 bits (70), Expect = 0.083
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +1

Query: 112 NLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPESNIASE 243
           N+  W+V + G P TLYEG  F     F   YP   P     S+
Sbjct: 65  NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSD 108


>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
           identical to gi:431269, SP:P42749
          Length = 185

 Score = 32.3 bits (70), Expect = 0.083
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +1

Query: 19  SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
           SPS+RR + +LM LM           ++ +  +  + V   G   ++YEG  + ++ +  
Sbjct: 3   SPSKRR-EMDLMKLMMSD-----YKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELP 56

Query: 199 NKYPFDSPESNIASEEIYYNKID 267
           + YP+ SP     + +IY+  +D
Sbjct: 57  DAYPYKSPSVGFIT-KIYHPNVD 78


>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
           identical to gi:431265, SP:P42748
          Length = 187

 Score = 31.9 bits (69), Expect = 0.11
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +1

Query: 19  SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198
           SPS+RR + ++M LM       T++  +       + V   G   +LY+G  + ++ +  
Sbjct: 3   SPSKRR-EMDMMKLMMSDYKVETINDGMQE-----FYVEFNGPKDSLYQGGVWKIRVELP 56

Query: 199 NKYPFDSPESNIASEEIYYNKID 267
           + YP+ SP     + +IY+  +D
Sbjct: 57  DAYPYKSPSVGFIT-KIYHPNVD 78


>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
           protein similar to TRAF6-regulated IKK activator 1 beta
           Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
           PF00179: Ubiquitin-conjugating enzyme
          Length = 158

 Score = 28.3 bits (60), Expect = 1.4
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 124 WTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSP 222
           WT  + G P T YEG+ F L+     +YP   P
Sbjct: 47  WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPP 79


>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
           cyclophilin-type family protein similar to cyclophylin
           [Digitalis lanata] GI:1563719; contains Pfam profile
           PF00160: peptidyl-prolyl cis-trans isomerase,
           cyclophilin-type; contains AT-donor splice site at
           intron 9
          Length = 570

 Score = 26.2 bits (55), Expect = 5.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 142 GVPGTLYEGEKFVLQFKFTNKYPFDSPE 225
           GVP  + +G  F  ++ F  KY   SPE
Sbjct: 408 GVPKRIRKGRGFTERYSFARKYHTPSPE 435


>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
           protein low similarity to ubiquitin-conjugating
           BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
           ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
           contains Pfam profile PF00179: Ubiquitin-conjugating
           enzyme
          Length = 907

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 15/64 (23%), Positives = 27/64 (42%)
 Frame = +1

Query: 31  RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210
           +++Q+E  +L    P  + V   +  + + L    + G PGT Y    F        +YP
Sbjct: 665 KKVQQEWSNLEANLPNTIYVR--VCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYP 722

Query: 211 FDSP 222
            + P
Sbjct: 723 HEPP 726


>At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam
           profiles: PF04096 nucleoporin autopeptidase, PF03093
           nucleoporin FG repeat family
          Length = 997

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = -2

Query: 182 STNFSPSYRVPGTPS 138
           +TNFSPS+  P TPS
Sbjct: 436 NTNFSPSFSQPTTPS 450


>At4g09760.3 68417.m01604 choline kinase, putative similar to GmCK2p
           choline kinase gi|1438881|gb|AAC49375
          Length = 255

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 134 IWKEYRALYMKAKNLCSNLNS 196
           IW   R    +AKNLCSN +S
Sbjct: 154 IWDRMRTWVGQAKNLCSNEHS 174


>At4g09760.2 68417.m01603 choline kinase, putative similar to GmCK2p
           choline kinase gi|1438881|gb|AAC49375
          Length = 346

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 134 IWKEYRALYMKAKNLCSNLNS 196
           IW   R    +AKNLCSN +S
Sbjct: 154 IWDRMRTWVGQAKNLCSNEHS 174


>At4g09760.1 68417.m01602 choline kinase, putative similar to GmCK2p
           choline kinase gi|1438881|gb|AAC49375
          Length = 346

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = +2

Query: 134 IWKEYRALYMKAKNLCSNLNS 196
           IW   R    +AKNLCSN +S
Sbjct: 154 IWDRMRTWVGQAKNLCSNEHS 174


>At1g35140.1 68414.m04356 phosphate-responsive protein, putative
           similar to phi-1 (phosphate-induced gene) [Nicotiana
           tabacum] GI:3759184; contains Pfam profile PF04674:
           Phosphate-induced protein 1 conserved region
          Length = 309

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = -2

Query: 209 GYLFVNLNWSTNFSPSYRVPGTPSICTVHNV-RFWLARSPSTVT 81
           G + +NL W   F PS R   T  + ++ +  R  +A++PS  T
Sbjct: 42  GDVSINLIWYGKFKPSQRAIVTDFVASLSSSRRSTMAQNPSVAT 85


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,800,851
Number of Sequences: 28952
Number of extensions: 153651
Number of successful extensions: 501
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 476
length of database: 12,070,560
effective HSP length: 71
effective length of database: 10,014,968
effective search space used: 390583752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -