BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0002_F11 (333 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 57 3e-09 At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 55 1e-08 At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 53 5e-08 At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 52 7e-08 At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 52 7e-08 At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 50 5e-07 At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 47 3e-06 At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 47 3e-06 At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 46 5e-06 At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 45 1e-05 At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 45 1e-05 At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 45 1e-05 At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 45 1e-05 At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 43 4e-05 At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 42 8e-05 At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 42 8e-05 At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 42 8e-05 At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 41 2e-04 At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 40 5e-04 At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 38 0.001 At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 38 0.002 At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 38 0.002 At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 38 0.002 At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 37 0.003 At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 37 0.003 At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 37 0.003 At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 37 0.003 At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 37 0.003 At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 37 0.003 At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 37 0.004 At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 37 0.004 At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 37 0.004 At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 36 0.007 At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 36 0.009 At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 36 0.009 At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 36 0.009 At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 35 0.012 At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 34 0.027 At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 32 0.083 At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 32 0.083 At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 32 0.11 At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 28 1.4 At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 26 5.5 At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 26 7.2 At1g59660.1 68414.m06710 nucleoporin family protein contains Pfa... 26 7.2 At4g09760.3 68417.m01604 choline kinase, putative similar to GmC... 25 9.5 At4g09760.2 68417.m01603 choline kinase, putative similar to GmC... 25 9.5 At4g09760.1 68417.m01602 choline kinase, putative similar to GmC... 25 9.5 At1g35140.1 68414.m04356 phosphate-responsive protein, putative ... 25 9.5 >At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17) E2; identical to gi:2801446 Length = 161 Score = 57.2 bits (132), Expect = 3e-09 Identities = 27/64 (42%), Positives = 34/64 (53%) Frame = +1 Query: 34 RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213 RLQKE M PP G S NL W + + GVPGTLY E + LQ +F YP Sbjct: 19 RLQKEFMEWQTNPPSGFK---HRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPM 75 Query: 214 DSPE 225 ++P+ Sbjct: 76 EAPQ 79 >At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15) E2; identical to ubiquitin-conjugating enzyme 15 GI:2801442 from [Arabidopsis thaliana] Length = 161 Score = 54.8 bits (126), Expect = 1e-08 Identities = 26/64 (40%), Positives = 34/64 (53%) Frame = +1 Query: 34 RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213 RLQKEL PP G + NL WT+ + G PGTLY E + LQ +F YP Sbjct: 19 RLQKELSEWQLNPPTGFR---HKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPM 75 Query: 214 DSPE 225 ++P+ Sbjct: 76 EAPQ 79 >At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18) E2; identical to gi:2801448 Length = 161 Score = 52.8 bits (121), Expect = 5e-08 Identities = 25/64 (39%), Positives = 33/64 (51%) Frame = +1 Query: 34 RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213 RLQKEL PP G + NL W + + G PGTLY E + LQ +F YP Sbjct: 19 RLQKELSEWQVNPPTGFK---HRVTDNLQKWVIEVTGAPGTLYANETYNLQVEFPQHYPM 75 Query: 214 DSPE 225 ++P+ Sbjct: 76 EAPQ 79 >At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) identical to ubiquitin-conjugating enzyme COP10 [Arabidopsis thaliana] GI:20065779; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 182 Score = 52.4 bits (120), Expect = 7e-08 Identities = 30/87 (34%), Positives = 44/87 (50%) Frame = +1 Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192 ++S S +R+Q+E+ L +PPP + NL W + G GT YEG F L Sbjct: 33 SVSASGKRIQREMAELNIDPPPDCSAGPK--GDNLYHWIATIIGPSGTPYEGGIFFLDII 90 Query: 193 FTNKYPFDSPESNIASEEIYYNKIDTA 273 F + YPF P+ + IY+ +DTA Sbjct: 91 FPSDYPFKPPKL-VFKTRIYHCNVDTA 116 >At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16) E2; identical to gi:2801444, GB:AAC39325 from [Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396 (1993)) Length = 161 Score = 52.4 bits (120), Expect = 7e-08 Identities = 25/64 (39%), Positives = 33/64 (51%) Frame = +1 Query: 34 RLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPF 213 RLQKEL+ PP G + NL W + + G PGTLY + + LQ F YP Sbjct: 19 RLQKELVEWQMNPPTGFK---HKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPM 75 Query: 214 DSPE 225 +SP+ Sbjct: 76 ESPQ 79 >At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19) nearly identical to ubiquitin-conjugating enzyme UBC19 [Arabidopsis thaliana] GI:22530865; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 181 Score = 49.6 bits (113), Expect = 5e-07 Identities = 24/65 (36%), Positives = 36/65 (55%) Frame = +1 Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 +RLQ ELM LM PG++ + N+ W + G T++EG ++ L F+N YP Sbjct: 39 KRLQSELMGLMMGADPGISAFPE--EDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYP 96 Query: 211 FDSPE 225 F SP+ Sbjct: 97 FKSPK 101 >At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14) E2; UbcAT3; identical to gi:2129757, S46656 Length = 167 Score = 47.2 bits (107), Expect = 3e-06 Identities = 26/69 (37%), Positives = 34/69 (49%) Frame = +1 Query: 37 LQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFD 216 LQK+L L K+P G + G + +N+ W+V + G P TLYEG F F YP Sbjct: 10 LQKQLKDLCKKPVDGFSA-GLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVS 68 Query: 217 SPESNIASE 243 P SE Sbjct: 69 PPTVTFTSE 77 >At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20) nearly identical to ubiquitin-conjugating enzyme UBC20 [Arabidopsis thaliana] GI:22530867; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 180 Score = 47.2 bits (107), Expect = 3e-06 Identities = 23/65 (35%), Positives = 35/65 (53%) Frame = +1 Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 +RLQ ELM LM PG++ + N+ W + G T++EG ++ L F+N YP Sbjct: 38 KRLQSELMGLMMGGGPGISAFPE--EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYP 95 Query: 211 FDSPE 225 F P+ Sbjct: 96 FKPPK 100 >At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative strong similar to ubiquitin-conjugating enzymes E2-17 from [Arabidopsis thaliana] SP|P35134, SP|P35132, SP|P35133; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 149 Score = 46.4 bits (105), Expect = 5e-06 Identities = 21/82 (25%), Positives = 43/82 (52%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ +EL + + PP + G +A +++ W + G + Y G F + F++ Sbjct: 2 ASKRISRELRDMQRHPPANCSA-GPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSD 60 Query: 205 YPFDSPESNIASEEIYYNKIDT 270 YPF P+ N + ++Y+ ID+ Sbjct: 61 YPFKPPKVNFKT-KVYHPNIDS 81 >At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2; identical to gi:2689242, SP:P42745 Length = 152 Score = 45.2 bits (102), Expect = 1e-05 Identities = 22/80 (27%), Positives = 38/80 (47%) Frame = +1 Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198 +P+ +RL ++ L ++PP G++ G N+ LW + G T ++G F L +F+ Sbjct: 3 TPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60 Query: 199 NKYPFDSPESNIASEEIYYN 258 YP P S + N Sbjct: 61 EDYPNKPPTVRFVSRMFHPN 80 >At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2; identical to gi:431259, SP:P25865 Length = 152 Score = 45.2 bits (102), Expect = 1e-05 Identities = 22/80 (27%), Positives = 38/80 (47%) Frame = +1 Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198 +P+ +RL ++ L ++PP G++ G N+ LW + G T ++G F L +F+ Sbjct: 3 TPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60 Query: 199 NKYPFDSPESNIASEEIYYN 258 YP P S + N Sbjct: 61 EDYPNKPPTVRFVSRMFHPN 80 >At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2; identical to gi:431259, SP:P25865 Length = 152 Score = 45.2 bits (102), Expect = 1e-05 Identities = 22/80 (27%), Positives = 38/80 (47%) Frame = +1 Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198 +P+ +RL ++ L ++PP G++ G N+ LW + G T ++G F L +F+ Sbjct: 3 TPARKRLMRDFKRLQQDPPAGIS--GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60 Query: 199 NKYPFDSPESNIASEEIYYN 258 YP P S + N Sbjct: 61 EDYPNKPPTVRFVSRMFHPN 80 >At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13) E2; identical to gi:992706 Length = 166 Score = 44.8 bits (101), Expect = 1e-05 Identities = 25/69 (36%), Positives = 33/69 (47%) Frame = +1 Query: 37 LQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFD 216 LQK+L L K P G + G + +N+ W+V + G P TLYEG F F YP Sbjct: 9 LQKQLKDLCKHPVDGFSA-GLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNS 67 Query: 217 SPESNIASE 243 P S+ Sbjct: 68 PPTVRFTSD 76 >At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 153 Score = 43.2 bits (97), Expect = 4e-05 Identities = 26/85 (30%), Positives = 43/85 (50%) Frame = +1 Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192 A S RR+ KE L+ EP PG++ + +N+ + V + G + YEG F L+ Sbjct: 2 ANSNLPRRIIKETQRLLSEPAPGISASP--SEENMRYFNVMILGPTQSPYEGGVFKLELF 59 Query: 193 FTNKYPFDSPESNIASEEIYYNKID 267 +YP +P+ + +IY+ ID Sbjct: 60 LPEEYPMAAPKVRFLT-KIYHPNID 83 >At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11) E2; identical to gi:12643427, SP:P35134 Length = 148 Score = 42.3 bits (95), Expect = 8e-05 Identities = 23/82 (28%), Positives = 44/82 (53%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G P + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPSNCSA-GPVA-EDMFHWQATIMGPPESPYAGGVFLVSIHFPPD 59 Query: 205 YPFDSPESNIASEEIYYNKIDT 270 YPF P+ + + ++Y+ I++ Sbjct: 60 YPFKPPKVSFKT-KVYHPNINS 80 >At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 153 Score = 42.3 bits (95), Expect = 8e-05 Identities = 26/85 (30%), Positives = 42/85 (49%) Frame = +1 Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192 A S RR+ KE L+ EP PG++ + N+ + V + G + YEG F L+ Sbjct: 2 ANSNLPRRIIKETQRLLSEPAPGISASP--SEDNMRYFNVMILGPTQSPYEGGVFKLELF 59 Query: 193 FTNKYPFDSPESNIASEEIYYNKID 267 +YP +P+ + +IY+ ID Sbjct: 60 LPEEYPMAAPKVRFLT-KIYHPNID 83 >At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative nearly identical to ubiquitin-conjugating enzyme E2 [Catharanthus roseus] GI:5381319; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 112 Score = 42.3 bits (95), Expect = 8e-05 Identities = 26/85 (30%), Positives = 42/85 (49%) Frame = +1 Query: 13 AMSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFK 192 A S RR+ KE L+ EP PG++ + N+ + V + G + YEG F L+ Sbjct: 2 ANSNLPRRIIKETQRLLSEPAPGISASP--SEDNMRYFNVMILGPTQSPYEGGVFKLELF 59 Query: 193 FTNKYPFDSPESNIASEEIYYNKID 267 +YP +P+ + +IY+ ID Sbjct: 60 LPEEYPMAAPKVRFLT-KIYHPNID 83 >At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family protein similar to Ubiquitin-conjugating enzyme E2-16 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) from {Schizosaccharomyces pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 154 Score = 40.7 bits (91), Expect = 2e-04 Identities = 21/54 (38%), Positives = 27/54 (50%) Frame = +1 Query: 106 SQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPESNIASEEIYYNKID 267 S N+ WT + G GT YEG F L KF YPF P+ + IY+ I+ Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKT-PIYHPNIN 85 >At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131 Length = 149 Score = 39.5 bits (88), Expect = 5e-04 Identities = 20/67 (29%), Positives = 33/67 (49%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 60 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 61 YPFKPPK 67 >At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative similar to Ubiquitin-conjugating enzyme E2 (Ubiquitin-protein ligase) (Ubiquitin carrier protein) from {Xenopus laevis} SP|P51669, {Schizosaccharomyces pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 409 Score = 38.3 bits (85), Expect = 0.001 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 7/87 (8%) Frame = +1 Query: 34 RLQKELMSLMKEPPPGVTVDGDLASQN-----LTLWTV--HMEGVPGTLYEGEKFVLQFK 192 R+QKEL L+ +PP G + ++ N T T+ +EG T+Y F L+ + Sbjct: 10 RMQKELKLLLSDPPHGASFPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFNLKIQ 69 Query: 193 FTNKYPFDSPESNIASEEIYYNKIDTA 273 +YPF P + A+ IY+ ID + Sbjct: 70 IPERYPFQPPIVSFAT-PIYHPNIDNS 95 >At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9 (UBC9) E2; identical to gi:297883, SP:P35132; identical to cDNA UBC9 for ubiquitin conjugating enzyme homolog GI:297883 Length = 178 Score = 37.5 bits (83), Expect = 0.002 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 32 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 89 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 90 YPFKPPK 96 >At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9 (UBC9) E2; identical to gi:297883, SP:P35132; identical to cDNA UBC9 for ubiquitin conjugating enzyme homolog GI:297883 Length = 148 Score = 37.5 bits (83), Expect = 0.002 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 59 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 60 YPFKPPK 66 >At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative identical or nearly so to Ubiquitin-conjugating enzymes SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis thaliana}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 148 Score = 37.5 bits (83), Expect = 0.002 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSDSPYSGGVFLVTIHFPPD 59 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 60 YPFKPPK 66 >At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative similar to ubiquitin conjugating enzyme 6 from [Homo sapiens] GI:14029267, [Mus musculus] GI:14029263; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 243 Score = 37.1 bits (82), Expect = 0.003 Identities = 21/64 (32%), Positives = 32/64 (50%) Frame = +1 Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 +RLQKE +L KEP V + ++ W +EG GT + G + + KF +YP Sbjct: 8 KRLQKEYRALCKEPVSHVVARP--SPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65 Query: 211 FDSP 222 + P Sbjct: 66 YKPP 69 >At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131 Length = 145 Score = 37.1 bits (82), Expect = 0.003 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 60 YPFKPPK 66 >At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131 Length = 148 Score = 37.1 bits (82), Expect = 0.003 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 60 YPFKPPK 66 >At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2; identical to gi:297882, SP:P35131 Length = 148 Score = 37.1 bits (82), Expect = 0.003 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPAESPYSGGVFLVTIHFPPD 59 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 60 YPFKPPK 66 >At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) {Pichia angusta}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 157 Score = 37.1 bits (82), Expect = 0.003 Identities = 22/81 (27%), Positives = 32/81 (39%) Frame = +1 Query: 16 MSPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKF 195 M S RL KE + +E + N+ WT ++G T YEG F L F Sbjct: 1 MQASRARLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSV 60 Query: 196 TNKYPFDSPESNIASEEIYYN 258 YP P+ ++ + N Sbjct: 61 PEPYPLQPPQVRFLTKIFHPN 81 >At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative similar to ubiquitin conjugating enzyme 6 from [Homo sapiens] GI:14029267, [Mus musculus] GI:14029263; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 237 Score = 37.1 bits (82), Expect = 0.003 Identities = 21/64 (32%), Positives = 32/64 (50%) Frame = +1 Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 +RLQKE +L KEP V + ++ W +EG GT + G + + KF +YP Sbjct: 8 KRLQKEYRALCKEPVSHVVARP--SPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65 Query: 211 FDSP 222 + P Sbjct: 66 YKPP 69 >At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10) E2; identical to gi:297877, SP:P35133 Length = 148 Score = 36.7 bits (81), Expect = 0.004 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSESPYAGGVFLVTIHFPPD 59 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 60 YPFKPPK 66 >At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10) E2; identical to gi:297877, SP:P35133 Length = 148 Score = 36.7 bits (81), Expect = 0.004 Identities = 20/67 (29%), Positives = 34/67 (50%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L K+PP + G +A +++ W + G + Y G F++ F Sbjct: 2 ASKRILKELKDLQKDPPTSCSA-GPVA-EDMFHWQATIMGPSESPYAGGVFLVTIHFPPD 59 Query: 205 YPFDSPE 225 YPF P+ Sbjct: 60 YPFKPPK 66 >At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative strong similarity to SP|P35133 Ubiquitin-conjugating enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis thaliana}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 148 Score = 36.7 bits (81), Expect = 0.004 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = +1 Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 RR+ KEL L ++PP V+ +++ W + G + Y G F++ F YP Sbjct: 4 RRILKELKELQRDPP--VSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61 Query: 211 FDSPE 225 F P+ Sbjct: 62 FKPPK 66 >At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative strong similarity to ubiquitin conjugating enzyme [Lycopersicon esculentum] GI:886679; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 192 Score = 35.9 bits (79), Expect = 0.007 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 1/71 (1%) Frame = +1 Query: 34 RLQKELMSLMK-EPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 R+QKEL + + G+ V S NLT T + G GT YEG F + + YP Sbjct: 6 RIQKELQDCERNQDSSGIRVCPK--SDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYP 63 Query: 211 FDSPESNIASE 243 F+ P+ +++ Sbjct: 64 FEPPKMQFSTK 74 >At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative strong similarity to ubiquitin-conjugating enzyme UBC2 [Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum sativum] GI:456568; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 148 Score = 35.5 bits (78), Expect = 0.009 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L ++PP V+ ++ W + G + + G F++ F Sbjct: 2 ASKRINKELRDLQRDPP--VSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPD 59 Query: 205 YPFDSPESNIASEEIYYNKIDT 270 YPF P+ + ++Y+ I++ Sbjct: 60 YPFKPPKVAFRT-KVYHPNINS 80 >At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative strong similarity to ubiquitin-conjugating enzyme UBC2 [Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum sativum] GI:456568; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 148 Score = 35.5 bits (78), Expect = 0.009 Identities = 19/82 (23%), Positives = 39/82 (47%) Frame = +1 Query: 25 SERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 + +R+ KEL L ++PP V+ ++ W + G + + G F++ F Sbjct: 2 ASKRINKELRDLQRDPP--VSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPD 59 Query: 205 YPFDSPESNIASEEIYYNKIDT 270 YPF P+ + ++Y+ I++ Sbjct: 60 YPFKPPKVAFRT-KVYHPNINS 80 >At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2; identical to gi|431267, SP:P42750, PIR:S52661; contains a ubiquitin-conjugating enzymes active site (PDOC00163) Length = 183 Score = 35.5 bits (78), Expect = 0.009 Identities = 24/83 (28%), Positives = 42/83 (50%) Frame = +1 Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198 SPS+RR + ++M LM TV+ DL ++ V G +LY+G + ++ + Sbjct: 3 SPSKRR-EMDMMKLMMSDYKVDTVNDDLQ-----MFYVTFHGPTDSLYQGGVWKIKVELP 56 Query: 199 NKYPFDSPESNIASEEIYYNKID 267 YP+ SP + +IY+ +D Sbjct: 57 EAYPYKSPSVGFVN-KIYHPNVD 78 >At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24 kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin carrier protein) {Homo sapiens}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 251 Score = 35.1 bits (77), Expect = 0.012 Identities = 20/76 (26%), Positives = 38/76 (50%) Frame = +1 Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 ++L KEL SL + PP G+ V + ++ + +EG GT YE F ++ ++ +P Sbjct: 13 KQLAKELKSLDESPPDGIKV--VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFP 70 Query: 211 FDSPESNIASEEIYYN 258 P+ ++ + N Sbjct: 71 HSPPKGYFMTKIFHPN 86 >At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative strong similarity to SP|P50550 Ubiquitin-like protein SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein ligase) (Ubiquitin carrier protein) (Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis}; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 160 Score = 33.9 bits (74), Expect = 0.027 Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 3/67 (4%) Frame = +1 Query: 34 RLQKELMSLMKEPPPGVTVD---GDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNK 204 RL +E S K P G G + NL +W + G GT +EG F L F+ Sbjct: 9 RLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSED 68 Query: 205 YPFDSPE 225 YP P+ Sbjct: 69 YPSKPPK 75 >At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2; identical to gi:992703, SP:P42747 Length = 198 Score = 32.3 bits (70), Expect = 0.083 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 Query: 112 NLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSPESNIASE 243 N+ W+V + G P TLYEG F F YP P S+ Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSD 108 >At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2; identical to gi:431269, SP:P42749 Length = 185 Score = 32.3 bits (70), Expect = 0.083 Identities = 21/83 (25%), Positives = 41/83 (49%) Frame = +1 Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198 SPS+RR + +LM LM ++ + + + V G ++YEG + ++ + Sbjct: 3 SPSKRR-EMDLMKLMMSD-----YKVEMINDGMQEFFVEFSGPKDSIYEGGVWKIRVELP 56 Query: 199 NKYPFDSPESNIASEEIYYNKID 267 + YP+ SP + +IY+ +D Sbjct: 57 DAYPYKSPSVGFIT-KIYHPNVD 78 >At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2; identical to gi:431265, SP:P42748 Length = 187 Score = 31.9 bits (69), Expect = 0.11 Identities = 21/83 (25%), Positives = 41/83 (49%) Frame = +1 Query: 19 SPSERRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFT 198 SPS+RR + ++M LM T++ + + V G +LY+G + ++ + Sbjct: 3 SPSKRR-EMDMMKLMMSDYKVETINDGMQE-----FYVEFNGPKDSLYQGGVWKIRVELP 56 Query: 199 NKYPFDSPESNIASEEIYYNKID 267 + YP+ SP + +IY+ +D Sbjct: 57 DAYPYKSPSVGFIT-KIYHPNVD 78 >At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family protein similar to TRAF6-regulated IKK activator 1 beta Uev1A [Homo sapiens] GI:10880969; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 158 Score = 28.3 bits (60), Expect = 1.4 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = +1 Query: 124 WTVHMEGVPGTLYEGEKFVLQFKFTNKYPFDSP 222 WT + G P T YEG+ F L+ +YP P Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPP 79 >At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein similar to cyclophylin [Digitalis lanata] GI:1563719; contains Pfam profile PF00160: peptidyl-prolyl cis-trans isomerase, cyclophilin-type; contains AT-donor splice site at intron 9 Length = 570 Score = 26.2 bits (55), Expect = 5.5 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = +1 Query: 142 GVPGTLYEGEKFVLQFKFTNKYPFDSPE 225 GVP + +G F ++ F KY SPE Sbjct: 408 GVPKRIRKGRGFTERYSFARKYHTPSPE 435 >At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family protein low similarity to ubiquitin-conjugating BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating enzyme [Mus musculus] GI:3319990; contains Pfam profile PF00179: Ubiquitin-conjugating enzyme Length = 907 Score = 25.8 bits (54), Expect = 7.2 Identities = 15/64 (23%), Positives = 27/64 (42%) Frame = +1 Query: 31 RRLQKELMSLMKEPPPGVTVDGDLASQNLTLWTVHMEGVPGTLYEGEKFVLQFKFTNKYP 210 +++Q+E +L P + V + + + L + G PGT Y F +YP Sbjct: 665 KKVQQEWSNLEANLPNTIYVR--VCEERMDLLRAALVGAPGTPYHDGLFFFDIMLPPQYP 722 Query: 211 FDSP 222 + P Sbjct: 723 HEPP 726 >At1g59660.1 68414.m06710 nucleoporin family protein contains Pfam profiles: PF04096 nucleoporin autopeptidase, PF03093 nucleoporin FG repeat family Length = 997 Score = 25.8 bits (54), Expect = 7.2 Identities = 10/15 (66%), Positives = 12/15 (80%) Frame = -2 Query: 182 STNFSPSYRVPGTPS 138 +TNFSPS+ P TPS Sbjct: 436 NTNFSPSFSQPTTPS 450 >At4g09760.3 68417.m01604 choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375 Length = 255 Score = 25.4 bits (53), Expect = 9.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 134 IWKEYRALYMKAKNLCSNLNS 196 IW R +AKNLCSN +S Sbjct: 154 IWDRMRTWVGQAKNLCSNEHS 174 >At4g09760.2 68417.m01603 choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375 Length = 346 Score = 25.4 bits (53), Expect = 9.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 134 IWKEYRALYMKAKNLCSNLNS 196 IW R +AKNLCSN +S Sbjct: 154 IWDRMRTWVGQAKNLCSNEHS 174 >At4g09760.1 68417.m01602 choline kinase, putative similar to GmCK2p choline kinase gi|1438881|gb|AAC49375 Length = 346 Score = 25.4 bits (53), Expect = 9.5 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 134 IWKEYRALYMKAKNLCSNLNS 196 IW R +AKNLCSN +S Sbjct: 154 IWDRMRTWVGQAKNLCSNEHS 174 >At1g35140.1 68414.m04356 phosphate-responsive protein, putative similar to phi-1 (phosphate-induced gene) [Nicotiana tabacum] GI:3759184; contains Pfam profile PF04674: Phosphate-induced protein 1 conserved region Length = 309 Score = 25.4 bits (53), Expect = 9.5 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -2 Query: 209 GYLFVNLNWSTNFSPSYRVPGTPSICTVHNV-RFWLARSPSTVT 81 G + +NL W F PS R T + ++ + R +A++PS T Sbjct: 42 GDVSINLIWYGKFKPSQRAIVTDFVASLSSSRRSTMAQNPSVAT 85 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 7,800,851 Number of Sequences: 28952 Number of extensions: 153651 Number of successful extensions: 501 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 471 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 476 length of database: 12,070,560 effective HSP length: 71 effective length of database: 10,014,968 effective search space used: 390583752 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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