Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F10
         (450 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5F31 Cluster: PREDICTED: similar to survival o...    64   2e-09
UniRef50_Q16Y09 Cluster: Putative uncharacterized protein; n=1; ...    47   2e-04
UniRef50_Q7Q266 Cluster: ENSANGP00000014329; n=1; Anopheles gamb...    42   0.006
UniRef50_O18870 Cluster: Survival motor neuron protein; n=6; Bos...    38   0.10 
UniRef50_Q9VV74 Cluster: CG16725-PA; n=2; Sophophora|Rep: CG1672...    36   0.31 
UniRef50_UPI0000E47871 Cluster: PREDICTED: similar to survival m...    36   0.54 
UniRef50_UPI00006CFDA5 Cluster: TPR Domain containing protein; n...    34   1.6  
UniRef50_A0J656 Cluster: Putative uncharacterized protein precur...    34   1.6  
UniRef50_Q7R4B7 Cluster: GLP_480_38963_36330; n=1; Giardia lambl...    32   5.0  
UniRef50_Q7NSR7 Cluster: Putative uncharacterized protein; n=1; ...    32   6.6  
UniRef50_A3ER35 Cluster: Membrane protein; n=1; Leptospirillum s...    32   6.6  
UniRef50_Q9U758 Cluster: Survival motor neuron protein; n=3; Cae...    31   8.8  
UniRef50_A5E4A9 Cluster: Putative uncharacterized protein; n=1; ...    31   8.8  

>UniRef50_UPI00015B5F31 Cluster: PREDICTED: similar to survival of
           motor neuron 1, telomeric; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to survival of motor neuron 1,
           telomeric - Nasonia vitripennis
          Length = 251

 Score = 63.7 bits (148), Expect = 2e-09
 Identities = 34/96 (35%), Positives = 45/96 (46%)
 Frame = +3

Query: 129 VLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTNTERNKEGDTXX 308
           VL+++G   S SD    D+WDD  L  AYDKA+ +A  EV KR+ + +     K      
Sbjct: 7   VLFVRGGGNSSSD----DVWDDSALVKAYDKAVNLAKEEVFKRIGLKSENNGAKHKKPQS 62

Query: 309 XXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
                          +W  G PCRA+Y  DG  YEA
Sbjct: 63  QKPARQAQKAQTTQKKWVIGSPCRAVYSEDGELYEA 98


>UniRef50_Q16Y09 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 285

 Score = 47.2 bits (107), Expect = 2e-04
 Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
 Frame = +3

Query: 141 KGMNTSESDGD--CEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTN 275
           K  N+S SDG+   +DIWDD  +   YD++L +   EVAKR+AM TN
Sbjct: 7   KASNSSSSDGEHSTDDIWDDTLIIRNYDESLAMVREEVAKRLAMKTN 53


>UniRef50_Q7Q266 Cluster: ENSANGP00000014329; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000014329 - Anopheles gambiae
           str. PEST
          Length = 232

 Score = 41.9 bits (94), Expect = 0.006
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = +3

Query: 177 EDIWDDKKLNDAYDKALRIANVEVAKRVAMSTN 275
           EDIWDD  +   YD +L +   EVAKR+AM+TN
Sbjct: 6   EDIWDDSIIIKKYDASLALIKAEVAKRLAMNTN 38


>UniRef50_O18870 Cluster: Survival motor neuron protein; n=6; Bos
           taurus|Rep: Survival motor neuron protein - Bos taurus
           (Bovine)
          Length = 287

 Score = 37.9 bits (84), Expect = 0.10
 Identities = 33/101 (32%), Positives = 45/101 (44%), Gaps = 2/101 (1%)
 Frame = +3

Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRIANVEVA-KRVAMSTNTERNK-E 293
           +  VL+ +G  T ESD    D+WDD  L  AYDKA  +A+ + A K   +S  +E+ K  
Sbjct: 12  EDSVLFRRG--TGESDDS--DVWDDTALIKAYDKA--VASFKHALKNGDISEASEKPKGT 65

Query: 294 GDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
                               +WK G  C AI+  DG  Y A
Sbjct: 66  PKRKSAKNKSQRKNTTSPSKQWKVGDNCCAIWSEDGCIYPA 106


>UniRef50_Q9VV74 Cluster: CG16725-PA; n=2; Sophophora|Rep:
           CG16725-PA - Drosophila melanogaster (Fruit fly)
          Length = 226

 Score = 36.3 bits (80), Expect = 0.31
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
 Frame = +3

Query: 162 SDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTN---TERNKEGDTXXXXXXXXXX 332
           SD     +WDD  L   YD+++ +A   +A+R+A STN    E     +           
Sbjct: 2   SDETNAAVWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGG 61

Query: 333 XXXXXDVEWKTGMPCRAIYEGDGLEYE 413
                 V +K G   RA Y  DG++YE
Sbjct: 62  ATSPEPVSFKVGDYARATYV-DGVDYE 87


>UniRef50_UPI0000E47871 Cluster: PREDICTED: similar to survival
           motor neuron protein; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to survival motor
           neuron protein - Strongylocentrotus purpuratus
          Length = 375

 Score = 35.5 bits (78), Expect = 0.54
 Identities = 26/95 (27%), Positives = 37/95 (38%)
 Frame = +3

Query: 162 SDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTNTERNKEGDTXXXXXXXXXXXXX 341
           SD D  DIWDD  L  AYDKA+      V       +  E   +                
Sbjct: 15  SDND-SDIWDDSALIKAYDKAISY----VKGMTKDGSEKEARSKPKRKRGGKKKNKKNLV 69

Query: 342 XXDVEWKTGMPCRAIYEGDGLEYEAF*LRTINDKE 446
               +WK G  C++++  D   Y A  ++ IN K+
Sbjct: 70  PSQTKWKVGDRCKSVFTEDEQVYSAV-VKAINHKK 103


>UniRef50_UPI00006CFDA5 Cluster: TPR Domain containing protein; n=1;
           Tetrahymena thermophila SB210|Rep: TPR Domain containing
           protein - Tetrahymena thermophila SB210
          Length = 1378

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = +3

Query: 108 NIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTNTERN 287
           NI S  E    K  N  +S  D E+  +DK+ N    KA +  N +  K+ +  T+ ++N
Sbjct: 140 NIFSNGEAAEQKQKNKRDSSDDDEEE-EDKEENTTEQKANKNENKQKEKQESQQTSEQKN 198

Query: 288 KE 293
           KE
Sbjct: 199 KE 200


>UniRef50_A0J656 Cluster: Putative uncharacterized protein
           precursor; n=2; Shewanella|Rep: Putative uncharacterized
           protein precursor - Shewanella woodyi ATCC 51908
          Length = 157

 Score = 33.9 bits (74), Expect = 1.6
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 234 QFLVLCHMHHSVFYHPKYLHSLHQIQKCSCLSCKVLHSST 115
           Q  + CH H  +F H  + H++H   K +C SC  LHS+T
Sbjct: 97  QACLQCHDHFRLFEHD-WSHAVHS-DKVNCASCHQLHSTT 134


>UniRef50_Q7R4B7 Cluster: GLP_480_38963_36330; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_480_38963_36330 - Giardia lamblia
           ATCC 50803
          Length = 877

 Score = 32.3 bits (70), Expect = 5.0
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
 Frame = +3

Query: 27  LFCSRY*NK---NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDK 197
           L  S Y N+   N  K+Y  KNI KL  K+    K +V   +       D D  D  +DK
Sbjct: 645 LLLSTYLNEFRANSGKVYKIKNIAKLETKLPDKPKDDVSNEEEKEKERPDTDIPDRTEDK 704

Query: 198 KLNDAYDKALR 230
            L   + K LR
Sbjct: 705 LLARYHLKLLR 715


>UniRef50_Q7NSR7 Cluster: Putative uncharacterized protein; n=1;
           Chromobacterium violaceum|Rep: Putative uncharacterized
           protein - Chromobacterium violaceum
          Length = 463

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +1

Query: 250 LNVLPCQQTLKGIKKEIPRIKKESLQNRRLRRKMSNGRPE 369
           L+V P QQ LK ++KEI  +KK+  Q + ++++  +   E
Sbjct: 43  LSVAPHQQDLKNVRKEIDTLKKDLAQKQTVQKEAQSAIKE 82


>UniRef50_A3ER35 Cluster: Membrane protein; n=1; Leptospirillum sp.
           Group II UBA|Rep: Membrane protein - Leptospirillum sp.
           Group II UBA
          Length = 398

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +1

Query: 289 KKEIPRIKKESLQNRRLRRKMSNGRPECHAELFMRAMD 402
           KKE  ++KKE +QN++L +K  N R +    +    MD
Sbjct: 49  KKEYEKLKKELIQNKKLEKKYLNKRDDLKFRMLELRMD 86


>UniRef50_Q9U758 Cluster: Survival motor neuron protein; n=3;
           Caenorhabditis|Rep: Survival motor neuron protein -
           Caenorhabditis elegans
          Length = 207

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 22/83 (26%), Positives = 36/83 (43%)
 Frame = +3

Query: 153 TSESDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTNTERNKEGDTXXXXXXXXXX 332
           +   D + +D+WDD +L   YD++L+    E++K    +  T R  +G+           
Sbjct: 6   SKSGDMEVDDVWDDTELIKMYDESLQ----EISKNETSAKITSRKFKGEDGKM------- 54

Query: 333 XXXXXDVEWKTGMPCRAIYEGDG 401
                   WK G  C A YE +G
Sbjct: 55  ------YTWKVGGKCMAPYEENG 71


>UniRef50_A5E4A9 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 1746

 Score = 31.5 bits (68), Expect = 8.8
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
 Frame = +3

Query: 99  FKINIMSKSEVLYMKGMNTSESDGD---CEDIWDDKKLNDAYDKALRIANVEVAK 254
           F+ NI    ++L    +NT++ D +   CED  D+K+++DA D+   +  V+ ++
Sbjct: 373 FRDNIPKDKKLLESITINTNQDDDEADNCEDGQDEKEVHDASDRQRALVKVDFSQ 427


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 346,175,201
Number of Sequences: 1657284
Number of extensions: 5425456
Number of successful extensions: 15788
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15776
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)