Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F10
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    25   0.33 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    25   0.33 
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   4.0  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    21   5.4  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    21   5.4  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 99  KIIFLYFWHYKFYLNFCFSTYCKTM 25
           + + L F+ Y FYL++ ++TY + +
Sbjct: 78  RFLCLPFYSYFFYLSYIYTTYSRKL 102


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 25.0 bits (52), Expect = 0.33
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -1

Query: 99  KIIFLYFWHYKFYLNFCFSTYCKTM 25
           + + L F+ Y FYL++ ++TY + +
Sbjct: 34  RFLCLPFYSYFFYLSYIYTTYSRKL 58


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 51  KNLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSE 161
           +NLS +   + I+ L    N +  SEVL     N S+
Sbjct: 125 RNLSSLQIGEKIQALDPSTNELVFSEVLLFLDYNPSQ 161


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 173 VSIRFRSVHAFHVKYFTLRHYINF 102
           V+++  ++H F V Y  L H++ +
Sbjct: 164 VTLQAYTLHLFCVLYVVLLHFLTY 187


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -2

Query: 173 VSIRFRSVHAFHVKYFTLRHYINF 102
           V+++  ++H F V Y  L H++ +
Sbjct: 164 VTLQAYTLHLFCVLYVVLLHFLTY 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,107
Number of Sequences: 336
Number of extensions: 1551
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)