Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F10
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 40 0.005
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 40 0.005
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 40 0.005
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 40 0.005
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 40 0.005
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 40 0.005
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 40 0.005
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 40 0.005
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 40 0.005
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 40 0.005
X72875-1|CAA51389.1| 764|Homo sapiens complement factor B protein. 30 3.2
S67310-1|AAD13989.1| 764|Homo sapiens complement factor B protein. 30 3.2
L15702-1|AAA16820.1| 764|Homo sapiens complement factor B protein. 30 3.2
K01566-1|AAA36225.2| 677|Homo sapiens MHC serum complement fact... 30 3.2
J00126-1|AAA36226.1| 171|Homo sapiens protein ( Human MHC class... 30 3.2
BX005143-8|CAM25864.1| 764|Homo sapiens complement factor B pro... 30 3.2
BC007990-1|AAH07990.1| 764|Homo sapiens complement factor B pro... 30 3.2
BC004143-1|AAH04143.1| 764|Homo sapiens complement factor B pro... 30 3.2
AL844853-12|CAI41860.1| 764|Homo sapiens B-factor, properdin pr... 30 3.2
AL844853-11|CAI41859.1| 621|Homo sapiens B-factor, properdin pr... 30 3.2
AL662849-6|CAI17456.1| 764|Homo sapiens complement factor B pro... 30 3.2
AL645922-7|CAI41725.2| 764|Homo sapiens complement factor B pro... 30 3.2
AK223400-1|BAD97120.1| 764|Homo sapiens complement factor B pre... 30 3.2
AF551848-1|AAN71991.1| 764|Homo sapiens B-factor, properdin pro... 30 3.2
AF349679-1|AAK30167.1| 621|Homo sapiens factor B protein. 30 3.2
AF019413-8|AAB67977.1| 764|Homo sapiens complement factor B pro... 30 3.2
BC039268-1|AAH39268.1| 998|Homo sapiens chromosome 11 open read... 29 9.7
AK023998-1|BAB14764.1| 523|Homo sapiens protein ( Homo sapiens ... 29 9.7
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 15 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 70
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 71 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 110
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.005
Identities = 30/104 (28%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Frame = +3
Query: 120 KSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKAL-----RIANVEVAKRVAMSTNTER 284
+ VL+ +G T +SD DIWDD L AYDKA+ + N ++ + T +
Sbjct: 16 EDSVLFRRG--TGQSDDS--DIWDDTALIKAYDKAVASFKHALKNGDICETSGKPKTTPK 71
Query: 285 NKEGDTXXXXXXXXXXXXXXXDVEWKTGMPCRAIYEGDGLEYEA 416
K +WK G C AI+ DG Y A
Sbjct: 72 RKPAKKNKSQKKNTAASLQ----QWKVGDKCSAIWSEDGCIYPA 111
>X72875-1|CAA51389.1| 764|Homo sapiens complement factor B protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>S67310-1|AAD13989.1| 764|Homo sapiens complement factor B protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>L15702-1|AAA16820.1| 764|Homo sapiens complement factor B protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>K01566-1|AAA36225.2| 677|Homo sapiens MHC serum complement factor
B protein.
Length = 677
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 351 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 409
Query: 234 ANVEVAK 254
A + V +
Sbjct: 410 AKISVIR 416
>J00126-1|AAA36226.1| 171|Homo sapiens protein ( Human MHC class
III factor B gene, Bb fragment, cDNA clone fb1. ).
Length = 171
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 100 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 158
Query: 234 ANVEVAK 254
A + V +
Sbjct: 159 AKISVIR 165
>BX005143-8|CAM25864.1| 764|Homo sapiens complement factor B
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>BC007990-1|AAH07990.1| 764|Homo sapiens complement factor B
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>BC004143-1|AAH04143.1| 764|Homo sapiens complement factor B
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AL844853-12|CAI41860.1| 764|Homo sapiens B-factor, properdin
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AL844853-11|CAI41859.1| 621|Homo sapiens B-factor, properdin
protein.
Length = 621
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AL662849-6|CAI17456.1| 764|Homo sapiens complement factor B
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AL645922-7|CAI41725.2| 764|Homo sapiens complement factor B
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AK223400-1|BAD97120.1| 764|Homo sapiens complement factor B
preproprotein variant protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AF551848-1|AAN71991.1| 764|Homo sapiens B-factor, properdin
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AF349679-1|AAK30167.1| 621|Homo sapiens factor B protein.
Length = 621
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>AF019413-8|AAB67977.1| 764|Homo sapiens complement factor B
protein.
Length = 764
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/67 (26%), Positives = 35/67 (52%)
Frame = +3
Query: 54 NLSKIYSAKNIEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRI 233
N++ + S K+ E+ FK+ M E ++ + ++ S+S C +W+ +K D Y K
Sbjct: 438 NINALASKKDNEQHVFKVKDMENLEDVFYQMIDESQSLSLCGMVWEHRKGTD-YHKQPWQ 496
Query: 234 ANVEVAK 254
A + V +
Sbjct: 497 AKISVIR 503
>BC039268-1|AAH39268.1| 998|Homo sapiens chromosome 11 open reading
frame 82 protein.
Length = 998
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 129 VLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTNTERNKEGD 299
+L ++ +S DGD + IWDD +++ +K L + E+A A ++ + + + D
Sbjct: 395 LLRLEETASSSQDGDPQ-IWDDLPFSESLNKFLAVLESEIAVTQADVSSRKHHVDND 450
>AK023998-1|BAB14764.1| 523|Homo sapiens protein ( Homo sapiens
cDNA FLJ13936 fis, clone Y79AA1000802. ).
Length = 523
Score = 28.7 bits (61), Expect = 9.7
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +3
Query: 129 VLYMKGMNTSESDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTNTERNKEGD 299
+L ++ +S DGD + IWDD +++ +K L + E+A A ++ + + + D
Sbjct: 94 LLRLEETASSSQDGDPQ-IWDDLPFSESLNKFLAVLESEIAVTQADVSSRKHHVDND 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,183,351
Number of Sequences: 237096
Number of extensions: 814425
Number of successful extensions: 1630
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1620
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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