Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F10
(450 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058529-1|AAL13758.1| 226|Drosophila melanogaster LD23602p pro... 36 0.019
AF296281-1|AAG17893.1| 226|Drosophila melanogaster survival mot... 36 0.019
AE014296-2759|AAF49446.1| 226|Drosophila melanogaster CG16725-P... 36 0.019
AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH1197... 29 2.2
AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA... 29 2.2
Y12498-1|CAA73100.1| 506|Drosophila melanogaster p60 protein. 29 2.9
Y11143-1|CAA72030.1| 506|Drosophila melanogaster phosphatidylin... 29 2.9
AY060429-1|AAL25468.1| 506|Drosophila melanogaster LD42724p pro... 29 2.9
AE014134-81|AAF51510.2| 506|Drosophila melanogaster CG2699-PA p... 29 2.9
L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like p... 28 5.0
AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p pro... 28 5.0
AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-P... 28 5.0
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 28 6.7
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P... 27 8.8
>AY058529-1|AAL13758.1| 226|Drosophila melanogaster LD23602p
protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 162 SDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTN---TERNKEGDTXXXXXXXXXX 332
SD +WDD L YD+++ +A +A+R+A STN E +
Sbjct: 2 SDETNAAVWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGG 61
Query: 333 XXXXXDVEWKTGMPCRAIYEGDGLEYE 413
V +K G RA Y DG++YE
Sbjct: 62 ATSPEPVSFKVGDYARATYV-DGVDYE 87
>AF296281-1|AAG17893.1| 226|Drosophila melanogaster survival motor
neuron protein SMN protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 162 SDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTN---TERNKEGDTXXXXXXXXXX 332
SD +WDD L YD+++ +A +A+R+A STN E +
Sbjct: 2 SDETNAAVWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGG 61
Query: 333 XXXXXDVEWKTGMPCRAIYEGDGLEYE 413
V +K G RA Y DG++YE
Sbjct: 62 ATSPEPVSFKVGDYARATYV-DGVDYE 87
>AE014296-2759|AAF49446.1| 226|Drosophila melanogaster CG16725-PA
protein.
Length = 226
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Frame = +3
Query: 162 SDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTN---TERNKEGDTXXXXXXXXXX 332
SD +WDD L YD+++ +A +A+R+A STN E +
Sbjct: 2 SDETNAAVWDDSLLVKTYDESVGLAREALARRLADSTNKREEENAAAAEEEAGEISATGG 61
Query: 333 XXXXXDVEWKTGMPCRAIYEGDGLEYE 413
V +K G RA Y DG++YE
Sbjct: 62 ATSPEPVSFKVGDYARATYV-DGVDYE 87
>AF145671-1|AAD38646.1| 800|Drosophila melanogaster BcDNA.GH11973
protein.
Length = 800
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 189 DDKKLNDAYDKALRIANVEVAKRVAMSTNTERNKE 293
++K+L+D Y + +R+AN E K++A + +R +E
Sbjct: 562 EEKRLHDLYAERIRLANTEREKQLAEAHEAKRLEE 596
>AE014296-3529|AAF51717.1| 800|Drosophila melanogaster CG6014-PA
protein.
Length = 800
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 189 DDKKLNDAYDKALRIANVEVAKRVAMSTNTERNKE 293
++K+L+D Y + +R+AN E K++A + +R +E
Sbjct: 562 EEKRLHDLYAERIRLANTEREKQLAEAHEAKRLEE 596
>Y12498-1|CAA73100.1| 506|Drosophila melanogaster p60 protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 151 TLLNLMETVKIFGMIKN*MMHMTKH*ELPMLK*LNVLPCQQTLKGIKKE--IPRIKKESL 324
TLLNL++ ++ G + N M K EL + + +N L + + ++K+ I R+K +L
Sbjct: 244 TLLNLLDALQAKGQVLNHYMENKKKEELLLERQINALKPELQILQLRKDKYIERLKGFNL 303
Query: 325 QNRRLRRKMSNG 360
++ L+ + G
Sbjct: 304 KDDDLKMILQMG 315
>Y11143-1|CAA72030.1| 506|Drosophila melanogaster
phosphatidylinositol 3-kinaseregulatory subunit protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 151 TLLNLMETVKIFGMIKN*MMHMTKH*ELPMLK*LNVLPCQQTLKGIKKE--IPRIKKESL 324
TLLNL++ ++ G + N M K EL + + +N L + + ++K+ I R+K +L
Sbjct: 244 TLLNLLDALQAKGQVLNHYMENKKKEELLLERQINALKPELQILQLRKDKYIERLKGFNL 303
Query: 325 QNRRLRRKMSNG 360
++ L+ + G
Sbjct: 304 KDDDLKMILQMG 315
>AY060429-1|AAL25468.1| 506|Drosophila melanogaster LD42724p
protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 151 TLLNLMETVKIFGMIKN*MMHMTKH*ELPMLK*LNVLPCQQTLKGIKKE--IPRIKKESL 324
TLLNL++ ++ G + N M K EL + + +N L + + ++K+ I R+K +L
Sbjct: 244 TLLNLLDALQAKGQVLNHYMENKKKEELLLERQINALKPELQILQLRKDKYIERLKGFNL 303
Query: 325 QNRRLRRKMSNG 360
++ L+ + G
Sbjct: 304 KDDDLKMILQMG 315
>AE014134-81|AAF51510.2| 506|Drosophila melanogaster CG2699-PA
protein.
Length = 506
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 151 TLLNLMETVKIFGMIKN*MMHMTKH*ELPMLK*LNVLPCQQTLKGIKKE--IPRIKKESL 324
TLLNL++ ++ G + N M K EL + + +N L + + ++K+ I R+K +L
Sbjct: 244 TLLNLLDALQAKGQVLNHYMENKKKEELLLERQINALKPELQILQLRKDKYIERLKGFNL 303
Query: 325 QNRRLRRKMSNG 360
++ L+ + G
Sbjct: 304 KDDDLKMILQMG 315
>L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like
protein protein.
Length = 621
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 271 QTLKGIKKEIPRIKKESLQNRRLRRKMSNGRPECHAELFMR 393
Q+L KK + K+ +L+N RLRR++ + R + AE R
Sbjct: 165 QSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLAR 205
>AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p
protein.
Length = 621
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 271 QTLKGIKKEIPRIKKESLQNRRLRRKMSNGRPECHAELFMR 393
Q+L KK + K+ +L+N RLRR++ + R + AE R
Sbjct: 165 QSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLAR 205
>AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-PA
protein.
Length = 621
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 271 QTLKGIKKEIPRIKKESLQNRRLRRKMSNGRPECHAELFMR 393
Q+L KK + K+ +L+N RLRR++ + R + AE R
Sbjct: 165 QSLADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLAR 205
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 271 QTLKGIKKEIPRIKKESLQNRRLRRKMSNGRPECHAELFMR 393
Q L KK + K+ +L+N RLRR++ + R + AE R
Sbjct: 165 QALADRKKFEDQAKELALENERLRRQLDDLRKQLEAETLAR 205
>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
protein.
Length = 1161
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 159 ESDGDCEDIWDDKKLNDAYDKALRIANVEVAKRVAMSTNT 278
E DGD DI DD+ + A D N E+AK+ ++T+T
Sbjct: 317 EDDGDDADIDDDEDIKSAID------NDELAKKYPVATST 350
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,567,691
Number of Sequences: 53049
Number of extensions: 257554
Number of successful extensions: 637
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 637
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1455824790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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