Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F10
         (450 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   2.0  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   3.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   3.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    22   3.6  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    21   6.2  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   6.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   8.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.2  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 192 HPKYLHSLHQIQKCSC 145
           HP+Y+      Q+C C
Sbjct: 346 HPEYIDETRNYQECKC 361


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 289 KKEIPRIKKESLQNRRLRRKMSNGRPECHAEL 384
           K   PR+ K +L++  +   +  G+P C  E+
Sbjct: 569 KYHAPRLAKLALESTSMIDVVRYGKPHCAEEI 600


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +1

Query: 289 KKEIPRIKKESLQNRRLRRKMSNGRPECHAEL 384
           K   PR+ K +L++  +   +  G+P C  E+
Sbjct: 607 KYHAPRLAKLALESTSMIDVVRYGKPHCAEEI 638


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 9/41 (21%), Positives = 19/41 (46%)
 Frame = +3

Query: 99  FKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKKLNDAYDK 221
           + I I++ +   +   M +    G C + W+ K   + YD+
Sbjct: 76  YYIVILAWAIFYFFMSMRSELPWGSCNNYWNTKNCVNPYDR 116


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +1

Query: 310 KKESLQNRRLRRKMSNGRPECHAELFMRAMDWNMRLFN 423
           K+   + R     MS   P   A LF+      MR+FN
Sbjct: 244 KRTRAEGRLSSDNMSKKSPVRKATLFLNMASVFMRIFN 281


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 165 QIQKCSCLSCKVLHSS 118
           Q   CSCL C  +  S
Sbjct: 322 QASSCSCLDCDEIRES 337


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/39 (23%), Positives = 17/39 (43%)
 Frame = +3

Query: 84  IEKLSFKINIMSKSEVLYMKGMNTSESDGDCEDIWDDKK 200
           +E   +  NIM  +   Y KG +  + D     +W + +
Sbjct: 321 VECYKYYGNIMVNAMCAYAKGKDACQMDSGGPVLWQNPR 359


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = -1

Query: 216 HMHHSVFYHPKYLHSLH 166
           H HH   YHP    S H
Sbjct: 319 HQHHPSQYHPHRGSSPH 335


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,224
Number of Sequences: 438
Number of extensions: 1661
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)