Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F09
(429 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 214 6e-55
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 206 1e-52
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 191 5e-48
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 182 2e-45
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 157 7e-38
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 151 6e-36
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 148 4e-35
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 147 7e-35
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 124 6e-28
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 116 2e-25
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 2e-21
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 101 8e-21
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 81 1e-14
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 77 2e-13
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 70 2e-11
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 69 5e-11
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 66 3e-10
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 60 3e-08
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 3e-08
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 3e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 1e-06
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 48 8e-05
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 44 0.001
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 42 0.004
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 38 0.12
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.36
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 0.82
UniRef50_Q38FY2 Cluster: Protein kinase, putative; n=1; Trypanos... 33 1.9
UniRef50_Q7R2S3 Cluster: GLP_291_73636_75723; n=2; Giardia intes... 32 4.4
UniRef50_UPI0000E48D50 Cluster: PREDICTED: similar to neurogenic... 32 5.8
UniRef50_Q18VR2 Cluster: Phage integrase; n=2; Clostridiales|Rep... 32 5.8
UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1; ... 32 5.8
UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR, substrat... 31 7.7
UniRef50_A6EAX4 Cluster: Hydrolase, alpha/beta fold family prote... 31 7.7
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 214 bits (523), Expect = 6e-55
Identities = 98/124 (79%), Positives = 105/124 (84%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 417 GATE 428
G TE
Sbjct: 121 GCTE 124
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 206 bits (504), Expect = 1e-52
Identities = 91/124 (73%), Positives = 104/124 (83%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
CQ+AY+RIEGD IVCAAY+HELP+YG+KVGLTNYAAAYCTG D +Y
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 417 GATE 428
G E
Sbjct: 121 GQVE 124
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 191 bits (466), Expect = 5e-48
Identities = 89/124 (71%), Positives = 98/124 (79%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY TG DS Y
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 417 GATE 428
G E
Sbjct: 121 GHEE 124
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 182 bits (444), Expect = 2e-45
Identities = 80/89 (89%), Positives = 87/89 (97%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIK 323
TCQ+AYSRIEGD I+CAAYSHELPRYG+K
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 157 bits (382), Expect = 7e-38
Identities = 67/103 (65%), Positives = 89/103 (86%)
Frame = +3
Query: 54 KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKD 233
+M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD
Sbjct: 23 EMPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKD 82
Query: 234 VTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 362
+ Q+ ++I GD +V AAY+HELP +GI+ GLTNYAAAY TG
Sbjct: 83 IIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATG 125
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 151 bits (366), Expect = 6e-36
Identities = 69/121 (57%), Positives = 84/121 (69%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY TG D Y
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYE 120
Query: 417 G 419
G
Sbjct: 121 G 121
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 148 bits (359), Expect = 4e-35
Identities = 70/102 (68%), Positives = 79/102 (77%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 362
CQ+A S IEGD I+ A S EL RYGI VGL NYAAAY TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATG 102
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 147 bits (357), Expect = 7e-35
Identities = 69/121 (57%), Positives = 80/121 (66%), Gaps = 2/121 (1%)
Frame = +3
Query: 72 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 245
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 246 VAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGAT 425
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y TG Y G T
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 426 E 428
E
Sbjct: 133 E 133
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 124 bits (300), Expect = 6e-28
Identities = 55/98 (56%), Positives = 69/98 (70%)
Frame = +3
Query: 69 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 248
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 249 AYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 362
+ + GD VC A S ELP+YGIK+GL+NY AAY TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG 101
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 116 bits (280), Expect = 2e-25
Identities = 49/107 (45%), Positives = 72/107 (67%)
Frame = +3
Query: 108 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 287
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 288 AYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTGATE 428
A S+EL R+G+ GL +YAAAY TG D++Y G T+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTK 413
Score = 45.2 bits (102), Expect = 6e-04
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 149
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 2e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 237 TCQVAYSRIEGD 272
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 101 bits (241), Expect = 8e-21
Identities = 47/110 (42%), Positives = 65/110 (59%)
Frame = +3
Query: 84 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 263
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 264 EGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLY 413
+GD ++ A S EL RYGI G TNY+AAY TG D +Y
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAMSLDEVY 113
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 80.6 bits (190), Expect = 1e-14
Identities = 36/71 (50%), Positives = 46/71 (64%)
Frame = +3
Query: 207 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXX 386
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ G+KVGLTNYAAAYC G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIGLLLAHRLL 60
Query: 387 XXXXXDSLYTG 419
D +Y G
Sbjct: 61 NRFGMDKIYEG 71
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/94 (37%), Positives = 56/94 (59%)
Frame = +3
Query: 81 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 260
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 261 IEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 362
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLG 102
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.7 bits (163), Expect = 2e-11
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 279 VCAAYSHEL-PRYGIKVGLTNYAAAYCTG 362
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 68.5 bits (160), Expect = 5e-11
Identities = 38/88 (43%), Positives = 50/88 (56%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 279 VCAAYSHELPRYGIKVGLTNYAAAYCTG 362
+ AAYS EL YG + + AAY TG
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTG 86
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 66.1 bits (154), Expect = 3e-10
Identities = 33/70 (47%), Positives = 40/70 (57%)
Frame = +3
Query: 219 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXX 398
++NK V CQV S + GD + +A S EL YG+KVGLTNYAAAYCTG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 399 XDSLYTGATE 428
DS + G E
Sbjct: 64 LDSQFVGKLE 73
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.7 bits (138), Expect = 3e-08
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 279 VCAAYSHELPRYGIKVGLTNYAAAYCTG 362
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 59.3 bits (137), Expect = 3e-08
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +3
Query: 99 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 278
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 279 VCAAYSHELPRYGIKVGLTNYAAAYCTG 362
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 3e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +3
Query: 105 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 200
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 54.0 bits (124), Expect = 1e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +3
Query: 102 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 281
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 282 CAAYSHELPRYGIKVGLTNYAAAYCTG 362
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 48.0 bits (109), Expect = 8e-05
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 230
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 231 DVTCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTG 362
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 44.0 bits (99), Expect = 0.001
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +3
Query: 96 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 275
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 276 IVCAAYSHEL-PRYG--IKVGLTNYAAAYCTG 362
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 42.3 bits (95), Expect = 0.004
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +3
Query: 114 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 290
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 291 YSHELPRYGIKVGLTNYAAAYCTG 362
L +YG+ + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 37.5 bits (83), Expect = 0.12
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +3
Query: 117 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 296
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 297 HELPRYGIKVGLTNYAAAYCTG 362
L + + + N Y G
Sbjct: 61 KTLKK-ALNIDGNNIQMYYLAG 81
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.9 bits (79), Expect = 0.36
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +3
Query: 117 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 296
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 297 HELPRYGIKVGLTNYAAAYCTG 362
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 0.82
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 237 TCQVA 251
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q38FY2 Cluster: Protein kinase, putative; n=1; Trypanosoma
brucei|Rep: Protein kinase, putative - Trypanosoma
brucei
Length = 650
Score = 33.5 bits (73), Expect = 1.9
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 428 FSGTCVETVQAEPLQQSSCQQQTSAVGS-SIVSQTH 324
+SGT + PL+ + C Q S V + SIVSQTH
Sbjct: 453 YSGTSASLITISPLRSTECMQSLSNVSTPSIVSQTH 488
>UniRef50_Q7R2S3 Cluster: GLP_291_73636_75723; n=2; Giardia
intestinalis|Rep: GLP_291_73636_75723 - Giardia lamblia
ATCC 50803
Length = 695
Score = 32.3 bits (70), Expect = 4.4
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = -2
Query: 248 NLTGNIFIG*PYNQSVLWS--VVFVFILDNEAFASIVVSFSL 129
NL GN+F G P+ L ++ V LDN +FAS++ S +L
Sbjct: 240 NLQGNLFTGDPFTTETLKPNHLLQVLDLDNNSFASVITSSAL 281
>UniRef50_UPI0000E48D50 Cluster: PREDICTED: similar to neurogenic
locus notch (notch); n=3; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to neurogenic locus
notch (notch) - Strongylocentrotus purpuratus
Length = 2205
Score = 31.9 bits (69), Expect = 5.8
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = -2
Query: 425 SGTCVETVQAEPLQQSSCQQQTSAVGSSIVSQT 327
SGTCV+T++++ Q S C Q + +G++ ++T
Sbjct: 1929 SGTCVKTIESDGRQTSRCDCQENYIGTTCETRT 1961
>UniRef50_Q18VR2 Cluster: Phage integrase; n=2; Clostridiales|Rep:
Phage integrase - Desulfitobacterium hafniense (strain
DCB-2)
Length = 317
Score = 31.9 bits (69), Expect = 5.8
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
Frame = +3
Query: 141 DYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEG--DHIVCAAYSHELPRY 314
D + +++ + K +Y I + NK +T + Y + E D + C + LPR
Sbjct: 171 DIDLKMSMLIVPRTKNGKQRYIPISKSLNKILTDYLDYRKAESEEDFLFCNEFGQYLPRT 230
Query: 315 GIKVGLTNY 341
+++G+T Y
Sbjct: 231 TLQIGITKY 239
>UniRef50_Q8I5A6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium falciparum 3D7|Rep: Putative uncharacterized
protein - Plasmodium falciparum (isolate 3D7)
Length = 1936
Score = 31.9 bits (69), Expect = 5.8
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 69 KVVKNKQYFKRYQVKFKRRREG-KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
+++K + F+ ++ +KR+RE K+ Y + V+++ NKYN + I L++KD+
Sbjct: 1107 ELLKKNRSFENHEQIYKRQREKLKSHYKSSMSKVIENSNKYNN-LIKDIEALNSKDI 1162
>UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR,
substrate-binding; n=1; Dechloromonas aromatica RCB|Rep:
Regulatory protein, LysR:LysR, substrate-binding -
Dechloromonas aromatica (strain RCB)
Length = 327
Score = 31.5 bits (68), Expect = 7.7
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +3
Query: 105 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVC 284
++K + R+G YY+ + V+ + +Y+ P RL+ +++ + A E H+
Sbjct: 4 RIKSRASRQGNW-YYSNQAFVLDETMRYDLPDLRLVAAIADSGSLTRAA----EQVHLAP 58
Query: 285 AAYSHELPRYGIKVGLTNYA 344
++ SH L + +G+ +A
Sbjct: 59 SSASHRLTQLEAALGIPLFA 78
>UniRef50_A6EAX4 Cluster: Hydrolase, alpha/beta fold family protein;
n=1; Pedobacter sp. BAL39|Rep: Hydrolase, alpha/beta
fold family protein - Pedobacter sp. BAL39
Length = 329
Score = 31.5 bits (68), Expect = 7.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 160 ASLSRIKTNTTLQSTD*LYGYPIKMLPVKLHTHALRVITLSVLPTLMNS 306
A+ ++I ++ + Y YP+K PV LR+ + V PT MN+
Sbjct: 18 AAWAQIPDTVSINLENVKYAYPVKYFPVHTEGQDLRMAYMDVRPTQMNN 66
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 433,750,142
Number of Sequences: 1657284
Number of extensions: 8148124
Number of successful extensions: 19715
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 19259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19695
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 20653970351
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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