Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_F09
(429 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein ... 215 4e-58
DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor prot... 24 2.6
EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein. 23 4.6
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 23 4.6
EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein. 23 6.1
EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein. 23 6.1
EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein. 23 6.1
EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein. 23 6.1
EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein. 23 6.1
EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein. 23 6.1
EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein. 23 6.1
EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein. 23 6.1
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 6.1
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 23 6.1
>AF002238-1|AAB97731.1| 327|Anopheles gambiae ribosomal protein L5
protein.
Length = 327
Score = 215 bits (526), Expect = 4e-58
Identities = 96/124 (77%), Positives = 106/124 (85%)
Frame = +3
Query: 57 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 236
MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1 MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60
Query: 237 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 416
TCQ+AY RIEGD IVCAAYSHELPRYG+KVGLTNYAAAYCTG D+LY
Sbjct: 61 TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120
Query: 417 GATE 428
G T+
Sbjct: 121 GCTD 124
>DQ103706-1|AAZ43087.1| 344|Anopheles gambiae pk-1 receptor
protein.
Length = 344
Score = 23.8 bits (49), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 214 TISRYFGVLYLFLSWTTRRL 155
TI RYF + + FLS T +L
Sbjct: 141 TIERYFAICHPFLSHTMSKL 160
>EF426175-1|ABO26418.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 23.0 bits (47), Expect = 4.6
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 222 ITVQSVGTLECCICFYPGQRGVCEHSSQ 139
+ QSV L C C P C+ S+Q
Sbjct: 19 LLAQSVSALRCYQCASPSSWSDCQASAQ 46
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 23.0 bits (47), Expect = 4.6
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -2
Query: 368 QQTSAVGSSIVSQTHLDTIAWEFM 297
++ SA+ + VSQ+ ++T WE +
Sbjct: 170 ERKSAIDLTFVSQSLMETTGWEVL 193
>EF426178-1|ABO26421.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426177-1|ABO26420.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426173-1|ABO26416.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426172-1|ABO26415.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426171-1|ABO26414.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426170-1|ABO26413.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426163-1|ABO26406.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>EF426161-1|ABO26404.1| 155|Anopheles gambiae unknown protein.
Length = 155
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 213 QSVGTLECCICFYPGQRGVCEHSSQ 139
QSV L C C P C+ S+Q
Sbjct: 22 QSVSALRCYQCASPSSWSDCQASAQ 46
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +1
Query: 124 VVREKLTTMLANASLSRIKTNTTLQSTD 207
V+RE L + + +KTN +STD
Sbjct: 1983 VMREALVNLTRESCYQIVKTNEVPESTD 2010
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 22.6 bits (46), Expect = 6.1
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 96 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYR 206
KR+ V R GK++++ + V+ D+ + P+ R
Sbjct: 25 KRHNVVVGRNGSGKSNFFYAIQFVLSDEFTHLRPEQR 61
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 473,396
Number of Sequences: 2352
Number of extensions: 9328
Number of successful extensions: 48
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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