Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F08
         (348 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK026973-1|BAB15609.1|  692|Homo sapiens protein ( Homo sapiens ...    30   1.7  

>AK026973-1|BAB15609.1|  692|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23320 fis, clone HEP12381. ).
          Length = 692

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
 Frame = -3

Query: 139 KQTLLIHIYIEKMSSLTYLFETIVETDILLF--LLAYKFSQDHVEFLV 2
           KQ L    ++    SL +L++  V   ++ F  LL YKFS DH+E  +
Sbjct: 358 KQKLGFLGFLLNAESLKWLYQNYVFPKVMPFPYLLTYKFSHDHLELFL 405


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,054,278
Number of Sequences: 237096
Number of extensions: 851441
Number of successful extensions: 1289
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1289
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)