Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F08
         (348 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.          25   0.34 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    24   0.45 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   1.0  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    23   1.4  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   2.4  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   5.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   7.3  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              20   9.6  

>AY352277-2|AAQ67419.1|   88|Apis mellifera EX4.8-5.8 protein.
          Length = 88

 Score = 24.6 bits (51), Expect = 0.34
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 126 SKVCFFVRGKLENYW 170
           SKVC  VR KLE  W
Sbjct: 54  SKVCIVVRRKLEENW 68


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.2 bits (50), Expect = 0.45
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 200 SNGCGFTLIGPVVFQFTSDKETNFAYTYI 114
           S G  FT  G V+ +FT     +F+YT +
Sbjct: 460 SRGLDFTPRGAVLARFTHLNHADFSYTIV 488


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = -3

Query: 163 FSSLPRTKKQTLLIHIYIEKMSSLTYLFETIVET--------DILLFLLAYKFSQDHVEF 8
           F    R +   L++H Y ++   L ++   IV+T        DI + +L  K   DHV+F
Sbjct: 120 FRCTERPEDGALILHYYSDR-PGLEHIVIGIVKTVAKKLHGTDIEMRILKTKNECDHVQF 178

Query: 7   LV 2
           L+
Sbjct: 179 LI 180


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 1.0
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
 Frame = -3

Query: 163 FSSLPRTKKQTLLIHIYIEKMSSLTYLFETIVET--------DILLFLLAYKFSQDHVEF 8
           F    R +   L++H Y ++   L ++   IV+T        DI + +L  K   DHV+F
Sbjct: 120 FRCTERPEDGALILHYYSDR-PGLEHIVIGIVKTVAKKLHGTDIEMRILKTKNECDHVQF 178

Query: 7   LV 2
           L+
Sbjct: 179 LI 180


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
           determiner protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 6/19 (31%), Positives = 15/19 (78%)
 Frame = -3

Query: 274 KQIEKTWLIEFEKYIAYNH 218
           +++++  ++E+E YI Y+H
Sbjct: 54  EKLKRKMILEYELYIKYSH 72


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 157 WKTTGPISVKPQPF 198
           WK+ G +  KP PF
Sbjct: 29  WKSRGVVGPKPVPF 42


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 20.6 bits (41), Expect = 5.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 245 FYEPCFLNLFVY 280
           FY PC + +F+Y
Sbjct: 352 FYIPCIIMVFLY 363


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 7.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -2

Query: 125  YTYIYREDVKLDIL 84
            +T  Y+EDVKL  L
Sbjct: 1286 FTATYKEDVKLPCL 1299


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 19.8 bits (39), Expect = 9.6
 Identities = 6/10 (60%), Positives = 7/10 (70%)
 Frame = -1

Query: 318 KCMSFILWEQ 289
           KC  + LWEQ
Sbjct: 70  KCYMYCLWEQ 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,336
Number of Sequences: 438
Number of extensions: 1887
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7936320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)