Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F04
         (355 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   7.5  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    20   7.5  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    20   7.5  

>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 270 VFHTTPKLIFVL*ERYTASPLNYY 341
           VF  T  ++ V+ ERY  +  NY+
Sbjct: 60  VFGNTLVILAVVRERYLHTATNYF 83


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 90  Y*KIIKFITRTSNCITDLWSYFIKSIK 10
           Y K I   T+       LW +F+K+ +
Sbjct: 71  YMKCIMIATKAMKNDVILWDFFVKNAR 97


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -2

Query: 90  Y*KIIKFITRTSNCITDLWSYFIKSIK 10
           Y K I   T+       LW +F+K+ +
Sbjct: 45  YMKCIMIATKAMKNDVILWDFFVKNAR 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,630
Number of Sequences: 438
Number of extensions: 1779
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8184330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)