Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F03
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   5.1  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   5.1  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   6.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   6.8  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    20   9.0  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    20   9.0  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    20   9.0  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 390 MSGRNINCFYCSNILYLNNVTSNRGSKYNS*LA*IYSYDILN 265
           +S  + N  Y +   Y NN  +N  + YN+    +Y   I+N
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIIN 123


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = -1

Query: 390 MSGRNINCFYCSNILYLNNVTSNRGSKYNS*LA*IYSYDILN 265
           +S  + N  Y +   Y NN  +N  + YN+    +Y   I+N
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNNNYNNNYNNNYKKLYKNYIIN 123


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 288 IYSYDILNNYNIV 250
           IY++DI   YN+V
Sbjct: 255 IYTHDIPETYNVV 267


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 288 IYSYDILNNYNIV 250
           IY++DI   YN+V
Sbjct: 255 IYTHDIPETYNVV 267


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 24  CNKYSKL*IKQQLSFIVITKPPSW 95
           C    +  IK+ + F+V  KP  W
Sbjct: 79  CTDKQREVIKKVIKFLVENKPELW 102


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 24  CNKYSKL*IKQQLSFIVITKPPSW 95
           C    +  IK+ + F+V  KP  W
Sbjct: 79  CTDKQREVIKKVIKFLVENKPELW 102


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = +3

Query: 24  CNKYSKL*IKQQLSFIVITKPPSW 95
           C    +  IK+ + F+V  KP  W
Sbjct: 79  CTDKQREVIKKVIKFLVENKPELW 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,711
Number of Sequences: 438
Number of extensions: 1546
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)