Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_F02
         (249 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.    21   2.6  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    20   4.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    20   4.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    19   6.0  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    19   6.0  

>AY563109-1|AAS99587.1|   46|Tribolium castaneum aristaless protein.
          Length = 46

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 212 SRVHHPDAAARLRLRRTPGLHRHHAQL 132
           SR H+PD   R  L    GL     Q+
Sbjct: 17  SRTHYPDVFTREELAMKIGLTEARIQV 43


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +2

Query: 68  QEALTECHCVPRRW 109
           Q  L  C C P +W
Sbjct: 94  QVILNSCFCDPAKW 107


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 19.8 bits (39), Expect = 4.5
 Identities = 6/14 (42%), Positives = 7/14 (50%)
 Frame = +2

Query: 68  QEALTECHCVPRRW 109
           Q  L  C C P +W
Sbjct: 94  QVILNSCFCDPAKW 107


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = -3

Query: 247 SPPSGRFFT-ISHRESTIQ 194
           SPP  +FF  I  ++S +Q
Sbjct: 71  SPPKTKFFNLIKRKDSPVQ 89


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 18  TAAVAVAGLIASLR 59
           T A+ VAG I+SLR
Sbjct: 480 TVALEVAGNISSLR 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,763
Number of Sequences: 336
Number of extensions: 497
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 47
effective length of database: 106,793
effective search space used:  3737755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)