Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E24
         (532 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   3.9  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    21   6.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   6.8  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   6.8  
AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2 prot...    21   8.9  

>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 304 PLILATQKQFNFTHILAPAT 363
           P  L  Q+ FN   +LAP+T
Sbjct: 239 PTPLVPQQGFNMERLLAPST 258


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = -1

Query: 139 FGWLVTIPHYYVLLRPTCFVNAAAVQSKIDAYCLVKTYFNVFFSLV 2
           FGW +     Y  L+   +++ A +    D Y +V     +F+  V
Sbjct: 225 FGWQILFLITYATLQILVYLHLAVMLGFQDIYMIVYIIVVIFWYTV 270


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 11/46 (23%), Positives = 20/46 (43%)
 Frame = -1

Query: 139 FGWLVTIPHYYVLLRPTCFVNAAAVQSKIDAYCLVKTYFNVFFSLV 2
           FGW +     Y  L+   +++ A +    D Y +V     +F+  V
Sbjct: 225 FGWQILFLITYATLQILVYLHLAVMLGFQDIYMIVYIIVVIFWYTV 270


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 206 PHFVPTTSTDISPP 165
           P  +PT ST  SPP
Sbjct: 221 PTGIPTPSTSASPP 234


>AY873913-1|AAW67569.2|  377|Tribolium castaneum chitinase 2
           protein.
          Length = 377

 Score = 20.6 bits (41), Expect = 8.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 353 AKIWVKLNCFCV 318
           AK WV L  FC+
Sbjct: 3   AKFWVNLALFCL 14


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,128
Number of Sequences: 336
Number of extensions: 2241
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12887571
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)