Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E24
(532 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein. 200 2e-51
BT009796-1|AAP88798.1| 333|Homo sapiens electron-transfer-flavo... 200 2e-51
BC095457-1|AAH95457.1| 333|Homo sapiens electron-transfer-flavo... 200 2e-51
BC015526-1|AAH15526.1| 333|Homo sapiens electron-transfer-flavo... 200 2e-51
AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer flavo... 200 2e-51
>J04058-1|AAA52406.1| 333|Homo sapiens ETFA protein.
Length = 333
Score = 200 bits (488), Expect = 2e-51
Identities = 95/156 (60%), Positives = 120/156 (76%)
Frame = +1
Query: 64 AQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCGPAADKIAKANGV 243
A L R QSTLV+AEH N+ L+P T N +TAA ++GGE+S LV GTKC A + K G+
Sbjct: 14 ASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGI 73
Query: 244 AKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPATAFGKAILPRVAAKLDVSPIT 423
AKVLVA+ D +KG E +TPLILATQKQFN+THI A A+AFGK +LPRVAAKL+V+PI+
Sbjct: 74 AKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPIS 133
Query: 424 DIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVR 531
DII +K +TFVRTIYAGNA+ T++ + VKV +VR
Sbjct: 134 DIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVR 169
>BT009796-1|AAP88798.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 200 bits (488), Expect = 2e-51
Identities = 95/156 (60%), Positives = 120/156 (76%)
Frame = +1
Query: 64 AQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCGPAADKIAKANGV 243
A L R QSTLV+AEH N+ L+P T N +TAA ++GGE+S LV GTKC A + K G+
Sbjct: 14 ASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGI 73
Query: 244 AKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPATAFGKAILPRVAAKLDVSPIT 423
AKVLVA+ D +KG E +TPLILATQKQFN+THI A A+AFGK +LPRVAAKL+V+PI+
Sbjct: 74 AKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPIS 133
Query: 424 DIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVR 531
DII +K +TFVRTIYAGNA+ T++ + VKV +VR
Sbjct: 134 DIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVR 169
>BC095457-1|AAH95457.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 200 bits (488), Expect = 2e-51
Identities = 95/156 (60%), Positives = 120/156 (76%)
Frame = +1
Query: 64 AQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCGPAADKIAKANGV 243
A L R QSTLV+AEH N+ L+P T N +TAA ++GGE+S LV GTKC A + K G+
Sbjct: 14 ASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGI 73
Query: 244 AKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPATAFGKAILPRVAAKLDVSPIT 423
AKVLVA+ D +KG E +TPLILATQKQFN+THI A A+AFGK +LPRVAAKL+V+PI+
Sbjct: 74 AKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPIS 133
Query: 424 DIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVR 531
DII +K +TFVRTIYAGNA+ T++ + VKV +VR
Sbjct: 134 DIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVR 169
>BC015526-1|AAH15526.1| 333|Homo sapiens
electron-transfer-flavoprotein, alpha polypeptide
(glutaric aciduria II) protein.
Length = 333
Score = 200 bits (488), Expect = 2e-51
Identities = 95/156 (60%), Positives = 120/156 (76%)
Frame = +1
Query: 64 AQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCGPAADKIAKANGV 243
A L R QSTLV+AEH N+ L+P T N +TAA ++GGE+S LV GTKC A + K G+
Sbjct: 14 ASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGI 73
Query: 244 AKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPATAFGKAILPRVAAKLDVSPIT 423
AKVLVA+ D +KG E +TPLILATQKQFN+THI A A+AFGK +LPRVAAKL+V+PI+
Sbjct: 74 AKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPIS 133
Query: 424 DIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVR 531
DII +K +TFVRTIYAGNA+ T++ + VKV +VR
Sbjct: 134 DIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVR 169
>AF436657-1|AAN03712.1| 333|Homo sapiens electron transfer
flavoprotein alpha-subunit protein.
Length = 333
Score = 200 bits (488), Expect = 2e-51
Identities = 95/156 (60%), Positives = 120/156 (76%)
Frame = +1
Query: 64 AQLRRLQSTLVLAEHNNEVLSPATQNALTAAKKIGGEISVLVVGTKCGPAADKIAKANGV 243
A L R QSTLV+AEH N+ L+P T N +TAA ++GGE+S LV GTKC A + K G+
Sbjct: 14 ASLLRFQSTLVIAEHANDSLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCKVAGI 73
Query: 244 AKVLVAESDAFKGFTAESITPLILATQKQFNFTHILAPATAFGKAILPRVAAKLDVSPIT 423
AKVLVA+ D +KG E +TPLILATQKQFN+THI A A+AFGK +LPRVAAKL+V+PI+
Sbjct: 74 AKVLVAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPIS 133
Query: 424 DIIGVKDANTFVRTIYAGNAILTLEAKDPVKVITVR 531
DII +K +TFVRTIYAGNA+ T++ + VKV +VR
Sbjct: 134 DIIAIKSPDTFVRTIYAGNALCTVKCDEKVKVFSVR 169
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,383,153
Number of Sequences: 237096
Number of extensions: 1327289
Number of successful extensions: 2391
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2389
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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