BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= S06A01NCLL0002_E22 (487 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 156 8e-39 10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 39 0.002 10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 38 0.003 02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 37 0.007 11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 35 0.040 02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 35 0.040 11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 34 0.053 08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 34 0.070 09_04_0029 - 13932414-13933416,13933821-13933903 33 0.12 09_04_0031 + 13946692-13946774,13947007-13948012 32 0.21 09_04_0028 - 13928542-13929538,13929736-13929818 32 0.28 10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 31 0.37 09_04_0030 + 13940168-13940250,13940703-13941714 31 0.37 08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 31 0.49 12_02_0973 + 24959440-24959451,24959962-24962195,24962539-249626... 31 0.65 11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 30 0.86 03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 29 2.6 05_07_0128 + 27879969-27880143,27880232-27881323,27883562-278836... 28 4.6 04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 28 4.6 04_03_0562 + 17190443-17190520,17190715-17190853,17190943-171910... 28 4.6 01_04_0043 + 15375459-15377606 28 4.6 02_03_0113 - 15381289-15381556,15381633-15381985,15382184-153822... 27 6.0 10_08_0645 - 19562886-19564484 27 8.0 01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 27 8.0 >08_02_1462 + 27308792-27308924,27309711-27309778,27309854-27310159, 27310168-27310839 Length = 392 Score = 156 bits (379), Expect = 8e-39 Identities = 78/174 (44%), Positives = 98/174 (56%), Gaps = 23/174 (13%) Frame = +2 Query: 17 LQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXX 196 L+++ +P + Y+V +RM VGICGSDVHY + HFV+KEPM++GHE Sbjct: 34 LKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHECAGVIEEV 93 Query: 197 XXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLCPDMSFCATPPVHGNLVRYYK----- 361 DRVA+EPG+ C C CK GRY+LC DM F ATPPVHG+L Sbjct: 94 GSGVTHLAVGDRVALEPGISCWRCRHCKGGRYNLCEDMKFFATPPVHGSLANQASKQFSS 153 Query: 362 ------------------HAADFCFKLPDHVSMEEGALLEPLSVGIHACRRGGV 469 H D CFKLP++VS+EEGA+ EPLSVG+HACRR V Sbjct: 154 ISISLQEEDAILINVVIVHPGDLCFKLPENVSLEEGAMCEPLSVGVHACRRADV 207 >10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638, 6192898-6193183,6193350-6193500,6193615-6193811 Length = 354 Score = 38.7 bits (86), Expect = 0.002 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 7/129 (5%) Frame = +2 Query: 59 EVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDRVA 238 +V LR+ G+C +DV W + + P++ GHE D V Sbjct: 36 DVSLRITHCGVCYADVA-WTRNILNNSMY--PLVPGHEIAGVVTEVGADVKSFKVGDHVG 92 Query: 239 IEPGV-PCRYCEFCKTGRYHLCPDMSFCATP-PVHGNLVR--YYKHAA---DFCFKLPDH 397 + V CR CE C + + C F G + + Y H +CFK+PD Sbjct: 93 VGTYVNSCRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDG 152 Query: 398 VSMEEGALL 424 +E+ A L Sbjct: 153 YPLEKAAPL 161 >10_08_0101 - 14789994-14790205,14790290-14790957,14791232-14791345, 14794826-14794932 Length = 366 Score = 38.3 bits (85), Expect = 0.003 Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 1/89 (1%) Frame = +2 Query: 53 DYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDR 232 D +V +++ GIC SD+H + H + P++ GHE DR Sbjct: 40 DDDVAIKILFCGICHSDLHCIKN-EWKHSIY--PLVPGHEIAGVVTEVGKNVTRFKAGDR 96 Query: 233 VAIEPGV-PCRYCEFCKTGRYHLCPDMSF 316 V + V CR CE C G + CP+ F Sbjct: 97 VGVGCMVNSCRSCESCNNGFENHCPEGVF 125 >02_05_1209 + 34948899-34948938,34949086-34949222,34949854-34949900, 34949990-34950315,34950640-34950722,34950801-34950876, 34951499-34951656,34951979-34952140,34952235-34952351 Length = 381 Score = 37.1 bits (82), Expect = 0.007 Identities = 23/81 (28%), Positives = 35/81 (43%) Frame = +2 Query: 59 EVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDRVA 238 EV +++ +C +D HY +G + P I+GHE D V Sbjct: 38 EVRVKILFTALCHTD-HYTWSGKDPEGLF--PCILGHEAAGIVESVGEGVTEVQPGDHVI 94 Query: 239 IEPGVPCRYCEFCKTGRYHLC 301 CR C+FCK+G+ +LC Sbjct: 95 PCYQAECRECKFCKSGKTNLC 115 >11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179, 5668278-5668339,5668434-5668509,5668612-5668694, 5668807-5669132,5669741-5669787,5669900-5670036, 5670135-5670168 Length = 379 Score = 34.7 bits (76), Expect = 0.040 Identities = 22/97 (22%), Positives = 40/97 (41%) Frame = +2 Query: 11 KDLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXX 190 K L + + + EV +++ +C +DV++W+ A G + P I+GHE Sbjct: 20 KPLSIEEVEVAPPQAMEVRVKILYTALCHTDVYFWE--AKGQTPV-FPRILGHEAGGIVE 76 Query: 191 XXXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301 D V C+ C+ CK+ ++C Sbjct: 77 SVGEGVTELAPGDHVLPVFTGECKECDHCKSEESNMC 113 >02_05_0070 - 25584690-25584806,25585151-25585312,25585396-25585491, 25585894-25585955,25586035-25586110,25586195-25586277, 25586456-25586778,25586882-25586928,25587014-25587150, 25587250-25587322,25588159-25588251,25588543-25588632, 25588684-25588786,25588869-25588981,25589181-25589778, 25589888-25590065,25590277-25590296,25590713-25590882, 25591245-25591485,25592997-25593199 Length = 994 Score = 34.7 bits (76), Expect = 0.040 Identities = 25/99 (25%), Positives = 39/99 (39%) Frame = +2 Query: 5 EAKDLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXX 184 +A ++ V+ PE E+ +++ IC SDV WQ+ A P I GHE Sbjct: 636 QALVMEEVEVAPPEA--MEIRVKVVSTSICRSDVTQWQSTAQTDLF---PRIFGHEASGV 690 Query: 185 XXXXXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301 D V C C+ C +G+ ++C Sbjct: 691 VESVGEGVTEFEVGDHVLTVFIGECMSCKHCVSGKSNMC 729 >11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822, 5635903-5635964,5636046-5636121,5636201-5636283, 5636369-5636694,5637524-5637570,5637668-5637804, 5638064-5638097 Length = 379 Score = 34.3 bits (75), Expect = 0.053 Identities = 23/98 (23%), Positives = 39/98 (39%) Frame = +2 Query: 8 AKDLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXX 187 AK L + + + EV +++ +C +DV++W+ A G + P I GHE Sbjct: 19 AKPLVIEEVEVAPPQAMEVRVKILFTSLCHTDVYFWE--AKGQTPV-FPRIFGHEAGGIV 75 Query: 188 XXXXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301 D V C+ C CK+ ++C Sbjct: 76 ESVGEGVTDLAPGDHVLPVFTGECKECAHCKSAESNMC 113 >08_01_1024 - 10349061-10349200,10349373-10350040,10350478-10350591, 10351956-10352032 Length = 332 Score = 33.9 bits (74), Expect = 0.070 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 7/131 (5%) Frame = +2 Query: 53 DYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDR 232 D +V++++ GIC SD+H + P++ GHE D+ Sbjct: 30 DDDVVIKILYCGICHSDLHSIKNEWKN---ATYPLVPGHEIAGVVTEAGKNVTKFKGGDK 86 Query: 233 VAIEPGV-PCRYCEFCKTGRYHLCPDMSFCATPPVHGNLVRYYKHAA------DFCFKLP 391 V + V C C+ C G + CP + F V Y +++ F + P Sbjct: 87 VGVGCMVNSCHSCDSCNQGLENHCPGVIFTYNSVDKDGTVTYGGYSSMVVVHERFVVRFP 146 Query: 392 DHVSMEEGALL 424 + + +++GA L Sbjct: 147 EAMPLDKGAPL 157 >09_04_0029 - 13932414-13933416,13933821-13933903 Length = 361 Score = 33.1 bits (72), Expect = 0.12 Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 1/87 (1%) Frame = +2 Query: 53 DYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDR 232 D +V +++ GIC +D+H + G+ + P++ GHE D Sbjct: 32 DDDVTIKVLYCGICHTDLHVVKND-WGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88 Query: 233 VAIEPGV-PCRYCEFCKTGRYHLCPDM 310 V + V CR C+ C G + CP M Sbjct: 89 VGVGFFVGSCRTCDSCGKGYENYCPTM 115 >09_04_0031 + 13946692-13946774,13947007-13948012 Length = 362 Score = 32.3 bits (70), Expect = 0.21 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = +2 Query: 59 EVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDRVA 238 +V +++ GIC +D+H + G+ + P++ GHE D V Sbjct: 34 DVTIKVLYCGICHTDLHIIKN-EWGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDTVG 90 Query: 239 IEPGVP-CRYCEFCKTGRYHLCPDM 310 + V CR C+ C G + CP M Sbjct: 91 VGYFVDSCRACDSCGKGYENYCPTM 115 >09_04_0028 - 13928542-13929538,13929736-13929818 Length = 359 Score = 31.9 bits (69), Expect = 0.28 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = +2 Query: 59 EVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDRVA 238 +V +++ GIC +D+H + G+ + P++ GHE D V Sbjct: 34 DVTIKVLYCGICHTDLHTIKN-EWGNAMY--PVVPGHEIVGVVAGVGAGVTRFKAGDTVG 90 Query: 239 IEPGVP-CRYCEFCKTGRYHLCPDM 310 + V CR C+ C G + CP M Sbjct: 91 VGYFVDSCRACDSCGKGDENYCPTM 115 >10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025, 3779206-3779288,3780456-3780799,3782064-3782113, 3782406-3782542,3782692-3782776 Length = 337 Score = 31.5 bits (68), Expect = 0.37 Identities = 20/81 (24%), Positives = 31/81 (38%) Frame = +2 Query: 59 EVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDRVA 238 EV L++ IC +D+ W+ K P I+GHE D V Sbjct: 53 EVRLKVLFTSICHTDLSAWKGE--NELQRKFPRILGHEAAGVVESVGEGVEDLAPGDHVV 110 Query: 239 IEPGVPCRYCEFCKTGRYHLC 301 C C +C++ + +LC Sbjct: 111 PIFTGECGACTYCESSKSNLC 131 >09_04_0030 + 13940168-13940250,13940703-13941714 Length = 364 Score = 31.5 bits (68), Expect = 0.37 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 1/87 (1%) Frame = +2 Query: 53 DYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDR 232 D +V +++ GIC +D+H + G+ + P++ GHE D Sbjct: 32 DDDVTIKVLYCGICHTDLHIVKND-WGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88 Query: 233 VAIEPGVP-CRYCEFCKTGRYHLCPDM 310 V + V CR CE C G + C M Sbjct: 89 VGVGYFVASCRGCECCGNGYENYCAKM 115 >08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-453330, 453426-453639,453756-453897,454076-454246,454586-454780 Length = 422 Score = 31.1 bits (67), Expect = 0.49 Identities = 29/118 (24%), Positives = 43/118 (36%), Gaps = 6/118 (5%) Frame = +2 Query: 11 KDLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXX 190 + L L +P E+L++ G+C SD+H + G P ++GHE Sbjct: 60 RPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLK----GELPFSSPCVVGHE-ITGEV 114 Query: 191 XXXXXXXXXXXXDRVAIEPGV------PCRYCEFCKTGRYHLCPDMSFCATPPVHGNL 346 +R + V PC C +C G+ LC SF A G L Sbjct: 115 VDHGTHTPAEIINRFPVGSHVVGAFIMPCGNCFYCVKGQEDLCE--SFFAYNRAKGTL 170 >12_02_0973 + 24959440-24959451,24959962-24962195,24962539-24962653, 24963146-24963943,24964140-24964422,24964500-24964951, 24965744-24965870,24965950-24966074,24966188-24966858, 24966976-24967093,24967177-24967293,24967564-24967658, 24968152-24968303,24968858-24968913,24969001-24969218, 24969842-24970239,24970345-24970628,24970730-24970836, 24970882-24970968,24971729-24971990,24972228-24972503, 24973197-24973254,24973437-24973756,24973889-24973999, 24974183-24974350,24974494-24974622,24974731-24974820, 24974934-24975040,24975133-24975281,24975584-24975666, 24975749-24975844,24975957-24976079,24976180-24976263, 24976371-24976511,24976652-24976951,24977386-24977453, 24977540-24977642,24979363-24979524,24979613-24981230, 24981270-24981661,24981689-24981991,24982078-24982161, 24982296-24982448,24982678-24982841,24982915-24983062, 24983209-24983331,24983409-24983496,24983686-24983867 Length = 4177 Score = 30.7 bits (66), Expect = 0.65 Identities = 17/36 (47%), Positives = 20/36 (55%) Frame = -2 Query: 468 TPPRRHACIPTESGSKSAPSSIDTWSGNLKQKSAAC 361 T P R CIP E+G KSA D S NL+ S+ C Sbjct: 3141 TNPARMRCIPPENGLKSA----DVSSDNLQDMSSCC 3172 >11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846, 5679345-5679406,5679648-5679723,5679847-5679929, 5680525-5680853,5681402-5681448,5681707-5681843, 5682093-5682126 Length = 380 Score = 30.3 bits (65), Expect = 0.86 Identities = 23/97 (23%), Positives = 36/97 (37%) Frame = +2 Query: 11 KDLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXX 190 K L + + + EV L++ +C +DV++W+ A G + P I GHE Sbjct: 20 KPLSIEEVEVAPPQAMEVRLKILYTALCHTDVYFWE--AKGQTPV-FPRIFGHEAGGIVE 76 Query: 191 XXXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301 D V C C C + +LC Sbjct: 77 SVGEGVTELSPGDHVLPVFTGECGDCRHCLSEESNLC 113 >03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507, 4661661-4661697 Length = 88 Score = 28.7 bits (61), Expect = 2.6 Identities = 14/39 (35%), Positives = 21/39 (53%) Frame = +2 Query: 56 YEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHE 172 +EV +++ C +C SDV +W+ F P I GHE Sbjct: 36 HEVRIKIVCTSLCHSDVTFWR---MQDFPGVFPRIFGHE 71 >05_07_0128 + 27879969-27880143,27880232-27881323,27883562-27883698, 27884179-27884409,27884707-27884730 Length = 552 Score = 27.9 bits (59), Expect = 4.6 Identities = 16/37 (43%), Positives = 21/37 (56%) Frame = -2 Query: 468 TPPRRHACIPTESGSKSAPSSIDTWSGNLKQKSAACL 358 TPPRRH T S S S+ S + S ++K +AA L Sbjct: 170 TPPRRHLLAATSSSSSSSDRSSGS-SKSVKPAAAALL 205 >04_04_1128 + 31103582-31103709,31105231-31105344,31105906-31106446, 31106911-31107003,31107041-31107194,31107296-31107498 Length = 410 Score = 27.9 bits (59), Expect = 4.6 Identities = 21/84 (25%), Positives = 32/84 (38%), Gaps = 1/84 (1%) Frame = +2 Query: 53 DYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXXXXXXXXXXXXDR 232 D +V +++ GIC SD+H + P++ GHE D Sbjct: 47 DDDVAIKVLYCGICHSDLHTIKNEWRNAVY---PVVAGHEITGVVTEVGKNVARFKAGDE 103 Query: 233 VAIEPGV-PCRYCEFCKTGRYHLC 301 V + V C CE C+ G + C Sbjct: 104 VGVGCMVNTCGGCESCRDGCENYC 127 >04_03_0562 + 17190443-17190520,17190715-17190853,17190943-17191034, 17191681-17191989,17192817-17193506 Length = 435 Score = 27.9 bits (59), Expect = 4.6 Identities = 17/51 (33%), Positives = 26/51 (50%) Frame = +2 Query: 8 AKDLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMI 160 A L+ V+ P+P + EVL++++ I SD+ Q G F K P I Sbjct: 22 AAALKFVEIPVPSVKKDEVLVKVEAASINQSDL-MTQKGMMRPFHPKFPFI 71 >01_04_0043 + 15375459-15377606 Length = 715 Score = 27.9 bits (59), Expect = 4.6 Identities = 9/18 (50%), Positives = 11/18 (61%) Frame = +1 Query: 427 ATLCGYTRVPSWRSLSWT 480 + +C Y R PSWR WT Sbjct: 416 SAICEYARRPSWRKSPWT 433 >02_03_0113 - 15381289-15381556,15381633-15381985,15382184-15382231, 15382260-15382439,15382835-15382954 Length = 322 Score = 27.5 bits (58), Expect = 6.0 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = +3 Query: 54 IMKCYCEWIALVYVAPTYTTGRL 122 +++CY WIA VY P Y+ GR+ Sbjct: 252 VVECYF-WIAGVYFEPCYSRGRI 273 >10_08_0645 - 19562886-19564484 Length = 532 Score = 27.1 bits (57), Expect = 8.0 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = -2 Query: 477 PAETPPRRHACIPTESGSKSAPSSIDTWSGNLKQKSAACL*YLTRLP*TGG 325 PA PP++ S S+ P WSG+L + SAA + P GG Sbjct: 433 PAPAPPQQQP--RASSASRPPPRLTARWSGHLDEASAADASAANQSPGGGG 481 >01_05_0562 - 23307526-23307875,23308149-23308452,23308543-23308647 Length = 252 Score = 27.1 bits (57), Expect = 8.0 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 1/32 (3%) Frame = +2 Query: 290 YHLCPDMSFCAT-PPVHGNLVRYYKHAADFCF 382 YH C D +CA PP V+ YK D CF Sbjct: 123 YHKCVD-DWCAKLPPYSSAKVQCYKKCGDKCF 153 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,650,804 Number of Sequences: 37544 Number of extensions: 258955 Number of successful extensions: 836 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 805 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 832 length of database: 14,793,348 effective HSP length: 77 effective length of database: 11,902,460 effective search space used: 999806640 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -