Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E22
         (487 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...   213   8e-56
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...   193   5e-50
AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical ...    70   1e-12
Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical pr...    54   7e-08
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    53   1e-07
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    32   0.19 
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    30   1.0  
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    30   1.0  
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    29   1.8  
AC024817-14|AAY86301.1|  354|Caenorhabditis elegans Hypothetical...    29   2.4  
U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score =  213 bits (519), Expect = 8e-56
 Identities = 94/158 (59%), Positives = 113/158 (71%)
 Frame = +2

Query: 14  DLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXX 193
           DL+L Q PIP+    +VL+++  VGICGSDVHYW  GA G FV+KEPMI+GHE       
Sbjct: 15  DLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSE 74

Query: 194 XXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLCPDMSFCATPPVHGNLVRYYKHAAD 373
                      DR+A+EPG+PC+ CE CKTGRY+LCP+M F ATPPVHG L R+  H AD
Sbjct: 75  VGNEVKHLKVGDRIAMEPGLPCKLCEHCKTGRYNLCPEMRFFATPPVHGTLSRFVVHDAD 134

Query: 374 FCFKLPDHVSMEEGALLEPLSVGIHACRRGGVSAGHVV 487
           FCFKLPD++S E+GAL+EPLSV IHACRRG V  GH V
Sbjct: 135 FCFKLPDNLSFEDGALIEPLSVAIHACRRGNVQMGHRV 172


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score =  193 bits (471), Expect = 5e-50
 Identities = 87/158 (55%), Positives = 109/158 (68%)
 Frame = +2

Query: 14  DLQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXX 193
           DL+L Q PI +    +VL++++ VGICGSDVH+   GA G FV+KEPM++GHE       
Sbjct: 15  DLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKEPMVLGHESSGVVSE 74

Query: 194 XXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLCPDMSFCATPPVHGNLVRYYKHAAD 373
                      DR+A+EPG+PC+ CE CK GRY+LCPDM F ATPPV+G L R+  H AD
Sbjct: 75  IGSEVKGFKVGDRIAMEPGLPCKLCEHCKIGRYNLCPDMRFFATPPVNGALSRFVVHDAD 134

Query: 374 FCFKLPDHVSMEEGALLEPLSVGIHACRRGGVSAGHVV 487
           FCFKLPD++S E+GALLEPLSV I ACRRG V  G  +
Sbjct: 135 FCFKLPDNLSFEDGALLEPLSVAIQACRRGTVQMGQKI 172


>AF125951-1|AAD14690.3|  326|Caenorhabditis elegans Hypothetical
           protein D2063.1 protein.
          Length = 326

 Score = 69.7 bits (163), Expect = 1e-12
 Identities = 38/97 (39%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
 Frame = +2

Query: 17  LQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXX 196
           L++ Q PIP+ N+ E+L++M+  GIC SDVH W      H+V K PMI GHE        
Sbjct: 22  LEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWLGDF--HYVSKCPMIGGHEGAGSVISV 79

Query: 197 XXXXXXXXXXDRVAIE-PGVPCRYCEFCKTGRYHLCP 304
                     D+V I+     C  CE+C+TG   LCP
Sbjct: 80  GSKVKNWQIGDKVGIKLVQGNCLNCEYCQTGHEPLCP 116


>Z81570-3|CAB04603.1|  351|Caenorhabditis elegans Hypothetical
           protein K12G11.4 protein.
          Length = 351

 Score = 53.6 bits (123), Expect = 7e-08
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
 Frame = +2

Query: 17  LQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKE--PMIMGHEXXXXXX 190
           L++ Q  +P+  + E+L++++  GIC SD+H W+    G F      P+I GHE      
Sbjct: 22  LEVRQVSVPQPQENELLVKIEYSGICHSDLHTWE----GDFEYASICPLIGGHEGAGTVV 77

Query: 191 XXXXXXXXXXXXDRVAIE-PGVPCRYCEFCKTGRYHLC 301
                       DR  I+     C  CE+CKTG   LC
Sbjct: 78  TIGSKVKGWNIGDRAGIKLINANCLNCEYCKTGHEPLC 115


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 52.8 bits (121), Expect = 1e-07
 Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +2

Query: 17  LQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXX 196
           L++ Q P+P   D E+L++++  GIC SD+H W        V   P++ GHE        
Sbjct: 21  LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVC--PLVGGHEGAGSVVQI 78

Query: 197 XXXXXXXXXXDRVAIE-PGVPCRYCEFCKTGRYHLC 301
                     D+  ++     C  CEFCK G   LC
Sbjct: 79  GKNVTGWQLGDKAGVKLMNFNCLNCEFCKKGHEPLC 114


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 20/95 (21%), Positives = 38/95 (40%)
 Frame = +2

Query: 17  LQLVQTPIPEINDYEVLLRMDCVGICGSDVHYWQTGACGHFVLKEPMIMGHEXXXXXXXX 196
           ++ +Q   P+ ++  V  ++    +C +D  Y   G     +   P+++GHE        
Sbjct: 25  IETIQVAPPKAHEVRVKFQILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIVESV 81

Query: 197 XXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301
                     D V       C+ CE+CK  + +LC
Sbjct: 82  GEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 116


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +2

Query: 152 PMIMGHEXXXXXXXXXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301
           P+++GHE                  D V       C+ CE+CK  + +LC
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 114


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +2

Query: 152 PMIMGHEXXXXXXXXXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301
           P+++GHE                  D V       C+ CE+CK  + +LC
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNLC 114


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 29.1 bits (62), Expect = 1.8
 Identities = 12/50 (24%), Positives = 20/50 (40%)
 Frame = +2

Query: 152 PMIMGHEXXXXXXXXXXXXXXXXXXDRVAIEPGVPCRYCEFCKTGRYHLC 301
           P+++GHE                  D V       C+ CE+CK  + ++C
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCKECEYCKNPKTNMC 287


>AC024817-14|AAY86301.1|  354|Caenorhabditis elegans Hypothetical
           protein Y54G2A.45 protein.
          Length = 354

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 266 CEFCKTGRYHLCPDMSFCATP 328
           CE C    YH C D   C TP
Sbjct: 21  CETCLGSGYHYCADSKLCNTP 41


>U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical
           protein F49E8.6 protein.
          Length = 166

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -2

Query: 486 TTCPAETPPRRHACIPTESGSKSAPSSIDTWSGNL 382
           ++ P+  PP    C P    S SAP ++ T SGNL
Sbjct: 117 SSTPSFAPPY---CAPPPGPSSSAPPTLPTSSGNL 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,936,582
Number of Sequences: 27780
Number of extensions: 200398
Number of successful extensions: 689
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)