Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E22
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    21   5.3  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.0  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   7.0  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 412 RGAFRATLCGYTRVPSWRS 468
           R AF+ T+C  TR+   RS
Sbjct: 336 RNAFKQTICCKTRIIGRRS 354


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 470 RLRHDGTRVYPQRVALKAPLLPLTRGQVT*NRSRQR 363
           R+  +   +YP+   L     PL RG++T N  + R
Sbjct: 14  RIPDEKNEMYPKDPYLYYDFYPLERGELT-NSGKMR 48


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -3

Query: 470 RLRHDGTRVYPQRVALKAPLLPLTRGQVT*NRSRQR 363
           R+  +   +YP+   L     PL RG++T N  + R
Sbjct: 29  RIPDEKNEMYPKDPYLYYDFYPLERGELT-NSGKMR 63


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = +1

Query: 280  NRTLPPLPG 306
            NR LPP+PG
Sbjct: 1650 NRKLPPVPG 1658


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +2

Query: 275 CKTGRYHLCPDMSFCATPPVHGNLVRYY 358
           C      + P +S  ATP  H  +  YY
Sbjct: 383 CPADWLWIVPPISGSATPVFHQEMALYY 410


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,101
Number of Sequences: 438
Number of extensions: 2839
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)