Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E21
(337 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 37 0.004
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 36 0.005
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 36 0.007
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 35 0.017
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 34 0.022
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 33 0.039
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.039
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 33 0.039
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 33 0.039
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 33 0.067
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 30 0.36
M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein. 29 0.63
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 28 1.4
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 28 1.4
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 27 2.5
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 27 2.5
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 27 2.5
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 27 2.5
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 27 2.5
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 27 4.4
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 27 4.4
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 26 5.8
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 26 7.7
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 26 7.7
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 26 7.7
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 26 7.7
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +2
Query: 182 VKNEYYRPWRHLAATARD-VGSCIKADKDKFQVNLDVQHFTPEEISVK 322
V+ Y+R H + D +G I D+ KF V LDV HF PE + +K
Sbjct: 25 VQFPYWRNADHNSFNFSDNIGEQIVNDESKFSVQLDVSHFKPENLKIK 72
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 36.3 bits (80), Expect = 0.005
Identities = 15/23 (65%), Positives = 19/23 (82%)
Frame = +2
Query: 260 KDKFQVNLDVQHFTPEEISVKTA 328
K+KF+V LDVQ FTP+EI VK +
Sbjct: 31 KEKFEVGLDVQFFTPKEIEVKVS 53
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 35.9 bits (79), Expect = 0.007
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 182 VKNEYYRPWRHLAATARD-VGSCIKADKDKFQVNLDVQHFTPEEISVK 322
V+ Y+R H + D +G I D+ KF V LDV HF PE++ ++
Sbjct: 25 VQFPYWRNADHNSFNFSDNIGEQIVNDESKFSVQLDVSHFKPEDLKIE 72
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 34.7 bits (76), Expect = 0.017
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 233 DVGSCIKADKDKFQVNLDVQHFTPEEISVKTAD 331
DV S + D +F V++D F PEEI VKT D
Sbjct: 102 DVNSNVVNDDRRFAVDMDCYQFRPEEIQVKTLD 134
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 34.3 bits (75), Expect = 0.022
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 182 VKNEYYRPWRHLAATARDVGSCIKADKDKFQVNLDVQHFTPEEISVK 322
V+ Y+R H + D I D+ KF V LDV HF PE + +K
Sbjct: 25 VQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPENLKIK 71
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 182 VKNEYYRPWRHLAATARDVGSCIKADKDKFQVNLDVQHFTPEEISVK 322
V+ Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 17 VQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 63
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 182 VKNEYYRPWRHLAATARDVGSCIKADKDKFQVNLDVQHFTPEEISVK 322
V+ Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 25 VQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 71
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 182 VKNEYYRPWRHLAATARDVGSCIKADKDKFQVNLDVQHFTPEEISVK 322
V+ Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 25 VQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 71
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 33.5 bits (73), Expect = 0.039
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 182 VKNEYYRPWRHLAATARDVGSCIKADKDKFQVNLDVQHFTPEEISVK 322
V+ Y+R H + D I D+ KF V LDV HF PE++ ++
Sbjct: 25 VQFPYWRNADHNSFNFSDNIGEIVNDESKFSVQLDVSHFKPEDLKIE 71
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 32.7 bits (71), Expect = 0.067
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 257 DKDKFQVNLDVQHFTPEEISVK 322
D+ KF V LDV HF PE + +K
Sbjct: 4 DESKFSVQLDVSHFKPENLKIK 25
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 30.3 bits (65), Expect = 0.36
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 248 IKADKDKFQVNLDVQHFTPEEISV 319
I DKF VNL+V +F PEE+ V
Sbjct: 45 IMNSNDKFAVNLNVSNFKPEELKV 68
>M31339-1|AAA28072.1| 22|Caenorhabditis elegans hsp16-48 protein.
Length = 22
Score = 29.5 bits (63), Expect = 0.63
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2
Query: 257 DKDKFQVNLDVQHFTPEE 310
D+ KF V LDV HF PE+
Sbjct: 5 DESKFSVQLDVSHFKPED 22
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 257 DKDKFQVNLDVQHFTPEEISVK 322
D D F+V L+ +F P+EI VK
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVK 51
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 257 DKDKFQVNLDVQHFTPEEISVK 322
D D F+V L+ +F P+EI VK
Sbjct: 30 DDDHFEVGLEAHNFLPKEIEVK 51
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 269 FQVNLDVQHFTPEEISVKTAD 331
F + +DV HF PEEI V D
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTD 124
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 27.5 bits (58), Expect = 2.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 269 FQVNLDVQHFTPEEISVKTAD 331
F + +DV HF PEEI V D
Sbjct: 104 FTIEIDVFHFMPEEIKVVLTD 124
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 251 KADKDKFQVNLDVQHFTPEEISVKTAD 331
++D ++ DV ++ PEE++VKT D
Sbjct: 22 ESDGKTLRLRFDVANYKPEEVTVKTID 48
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 251 KADKDKFQVNLDVQHFTPEEISVKTAD 331
++D ++ DV ++ PEE++VKT D
Sbjct: 119 ESDGKTLRLRFDVANYKPEEVTVKTID 145
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 251 KADKDKFQVNLDVQHFTPEEISVKTAD 331
++D ++ DV ++ PEE++VKT D
Sbjct: 133 ESDGKTLRLRFDVANYKPEEVTVKTID 159
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 224 TARDVGSCIKA--DKDKFQVNLDVQHFTPEEISVKTAD 331
T VG I + ++ V++DV F PEE+ V D
Sbjct: 40 TGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVD 77
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 224 TARDVGSCIKA--DKDKFQVNLDVQHFTPEEISVKTAD 331
T VG I + ++ V++DV F PEE+ V D
Sbjct: 39 TGHRVGDAIDVVNNDQEYNVSVDVSQFEPEELKVNIVD 76
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 260 KDKFQVNLDVQHFTPEEISVK 322
+D F+V L+ +F P EI VK
Sbjct: 30 EDHFEVGLEAHNFLPNEIDVK 50
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 266 KFQVNLDVQHFTPEEISVKTADGY 337
KF +NL+V F PE++ + DG+
Sbjct: 49 KFAINLNVSQFKPEDLKI-NLDGH 71
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 266 KFQVNLDVQHFTPEEISVKTADGY 337
KF +NL+V F PE++ + DG+
Sbjct: 49 KFAINLNVSQFKPEDLKI-NLDGH 71
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 266 KFQVNLDVQHFTPEEISVKTADGY 337
KF +NL+V F PE++ + DG+
Sbjct: 49 KFAINLNVSQFKPEDLKI-NLDGH 71
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 25.8 bits (54), Expect = 7.7
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +2
Query: 266 KFQVNLDVQHFTPEEISVKTADGY 337
KF +NL+V F PE++ + DG+
Sbjct: 50 KFAINLNVSQFKPEDLKI-NLDGH 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,754,482
Number of Sequences: 27780
Number of extensions: 113691
Number of successful extensions: 264
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 264
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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