Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E21
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    25   0.32 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          20   7.0  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              20   7.0  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              20   7.0  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    20   7.0  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      20   7.0  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    20   9.2  
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      20   9.2  

>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 24.6 bits (51), Expect = 0.32
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
 Frame = +2

Query: 83  FDYEIERPRRLLDQHFGLAITPED-LLNASIGPMVKNEYYRP 205
           FDY+   P+ +     G + T +D +   ++ PM  N YY P
Sbjct: 232 FDYD---PKYIKMMDAGESFTAQDGIFGMALSPMTNNLYYSP 270


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 166 IYRPDGKKRILPPV 207
           I+RPD K   LPP+
Sbjct: 147 IHRPDTKLMKLPPM 160


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 55  ISIDENNFVKRLADCALV 2
           I +DEN   K +A+C+++
Sbjct: 90  IYLDENVIKKLVAECSVI 107


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -1

Query: 55  ISIDENNFVKRLADCALV 2
           I +DEN   K +A+C+++
Sbjct: 90  IYLDENVIKKLVAECSVI 107


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 134 LAITPEDLLNASIGPMVKNEYYRPW 208
           LAI+   ++     PMV N YY  W
Sbjct: 60  LAISDFLMMFCMSPPMVINCYYETW 84


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 166 IYRPDGKKRILPPV 207
           I+RPD K   LPP+
Sbjct: 147 IHRPDTKLMKLPPM 160


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 176 PMVKNEYYRPW 208
           PMV N YY  W
Sbjct: 108 PMVINCYYETW 118


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 232 SGGGGEMTPRAVVFVFYH 179
           S GG E+TPR     ++H
Sbjct: 149 SSGGEEITPRQSHQSYHH 166


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,432
Number of Sequences: 438
Number of extensions: 1408
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)