Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E20
(511 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 101 6e-23
SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism... 99 4e-22
SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde reduc... 77 2e-15
SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyc... 69 5e-13
SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyc... 68 7e-13
SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomy... 45 8e-06
SPCC965.06 |||potassium channel subunit |Schizosaccharomyces pom... 43 2e-05
SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase YakC|Schizo... 33 0.025
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 27 2.2
SPBC215.11c |||aldo/keto reductase, unknown biological role|Schi... 25 5.0
SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1 |Sc... 25 6.6
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 101 bits (242), Expect = 6e-23
Identities = 58/117 (49%), Positives = 79/117 (67%)
Frame = +2
Query: 110 LNDGYKIPVLALGTGRGTASESDTLDQVRQAVFWAIEAGYRHIDTAAVYGDEEQVGQGIA 289
L DG KIP L LGT R SE + Q + AV A++ GYRHID AA+YG+E++VG GI
Sbjct: 18 LADGSKIPGLGLGTWR---SEPN---QTKNAVKTALQYGYRHIDAAAIYGNEDEVGDGIK 71
Query: 290 EAIAKGLVTREDLFITTKLWNDKHARGQVVPTLRESLQRLGLDYVDLYLIHFPISSK 460
E+ G V R+D+++T+KLW + HA V L ++L+ L LDY+D YLIH+P+S K
Sbjct: 72 ES---G-VPRKDIWVTSKLWCNAHAPEAVPKALEKTLKDLKLDYLDEYLIHWPVSFK 124
>SPBC8E4.04 |||aldo/keto reductase involved in pentose catabolism
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 98.7 bits (235), Expect = 4e-22
Identities = 52/115 (45%), Positives = 76/115 (66%)
Frame = +2
Query: 110 LNDGYKIPVLALGTGRGTASESDTLDQVRQAVFWAIEAGYRHIDTAAVYGDEEQVGQGIA 289
L +G KIP + LGT R D+ + AV A++AGYRHIDTA +YG+E+++G+GI
Sbjct: 17 LPNGDKIPSIGLGTWRSGK------DETKNAVCAALKAGYRHIDTAHIYGNEKEIGEGIR 70
Query: 290 EAIAKGLVTREDLFITTKLWNDKHARGQVVPTLRESLQRLGLDYVDLYLIHFPIS 454
E+ G V R D+++T+KLW + H G V L ++LQ L L+Y+D YLIH+P +
Sbjct: 71 ES---G-VPRTDIWVTSKLWCNAHRAGLVPLALEKTLQDLNLEYIDAYLIHWPFA 121
>SPAC19G12.09 |||NADH/NADPH dependent indole-3-acetaldehyde
reductase AKR3C2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 284
Score = 76.6 bits (180), Expect = 2e-15
Identities = 49/113 (43%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +2
Query: 119 GYKIPVLALGTGRGT-ASESDTLDQ-VRQAVFWAIEAGYRHIDTAAVYGDEEQVGQGIAE 292
G KIPV A G G E +++ + +V A+ AG+ HID A VYG+EE+VG + E
Sbjct: 7 GPKIPVPAYGVGTALFKKEKGEINRTIVDSVKNALAAGFIHIDCAEVYGNEEEVGVALKE 66
Query: 293 AIAKGLVTREDLFITTKLWNDKHARGQVVPTLRESLQRLGLDYVDLYLIHFPI 451
A V R LFIT+K+ H + L ESL++LG DY+DLYL+H PI
Sbjct: 67 A----NVPRSKLFITSKV---MHNVDNIPEALNESLRKLGTDYLDLYLLHSPI 112
>SPAP32A8.02 |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 68.5 bits (160), Expect = 5e-13
Identities = 37/83 (44%), Positives = 50/83 (60%)
Frame = +2
Query: 212 AIEAGYRHIDTAAVYGDEEQVGQGIAEAIAKGLVTREDLFITTKLWNDKHARGQVVPTLR 391
A+++GYRHIDTAAVYG+E+ G+ I + K V R D+F+T+KL N +R
Sbjct: 41 ALDSGYRHIDTAAVYGNEDICGKAIVDWCEKNNVKRTDIFLTSKLANCSDYY-STRAAIR 99
Query: 392 ESLQRLGLDYVDLYLIHFPISSK 460
SL LG Y+DL+LI P K
Sbjct: 100 SSLHHLG-TYIDLFLIQSPAGGK 121
>SPAC2F3.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 275
Score = 68.1 bits (159), Expect = 7e-13
Identities = 38/120 (31%), Positives = 67/120 (55%)
Frame = +2
Query: 107 QLNDGYKIPVLALGTGRGTASESDTLDQVRQAVFWAIEAGYRHIDTAAVYGDEEQVGQGI 286
+LN+G K P A G+ + + D +V+ A++ GYRHID+A +Y +E G+ I
Sbjct: 7 KLNNGLKCPQFAYGSYM--VNRTKCFD----SVYAALQCGYRHIDSAQMYHNEADCGRAI 60
Query: 287 AEAIAKGLVTREDLFITTKLWNDKHARGQVVPTLRESLQRLGLDYVDLYLIHFPISSKAD 466
+ + + RED++ T+KL ND + ++ S++ GL Y+DL+L+H P + +
Sbjct: 61 LKFMEETGTKREDIWFTSKL-NDLSGYKSTLSSIDASVKACGLGYIDLFLLHSPYGDRIE 119
>SPBC28F2.05c |||xylose and arabinose reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 276
Score = 44.8 bits (101), Expect = 8e-06
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Frame = +2
Query: 197 QAVFWAIEAGYRHIDTAAVYGDEEQVGQGIAEAIAKGL-VTREDLFITTKLWNDKHARGQ 373
Q V A+ G R ID+A Y +E++ Q I + + + + RED+ + TK+ + +
Sbjct: 28 QQVIEALSLGIRVIDSAITYRNEKECEQAIQDFCHQNVNIKREDITLITKIPDSLQGFER 87
Query: 374 VVPTLRESLQRLGLDYVDLYLIHFP 448
+ +SL+R G +D+ LIH P
Sbjct: 88 TWKAVEQSLRRTGRPKLDVVLIHSP 112
>SPCC965.06 |||potassium channel subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 344
Score = 43.2 bits (97), Expect = 2e-05
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Frame = +2
Query: 119 GYKIPVLALGTGRGTASESDTLDQVRQAVFWAIEAGYRHIDTAAVY--GDEEQV-GQGIA 289
G K+ +LG +E ++ + + A + G DTA +Y G+ E V G+ I
Sbjct: 22 GLKVSAFSLGGWLTYGNEGYDVEHTKNCLKQAWDLGINTFDTAEIYSNGNSETVMGKAIK 81
Query: 290 EA---IAKGLVTREDLF-ITTKLWNDKH-ARGQVVPTLRESLQRLGLDYVDLYLIHFP 448
E ++ ++T + F TKL N +R ++ L SL+RLGL YVD+ + H P
Sbjct: 82 ELGWDRSEYVITTKVFFGAGTKLPNTTGLSRKHIIEGLNASLKRLGLPYVDVIMAHRP 139
>SPAC1F7.12 |yak3|yakC, SPAC21E11.01|aldose reductase
YakC|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 33.1 bits (72), Expect = 0.025
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Frame = +2
Query: 128 IPVLALGTGRGTASESDTLDQVRQAVFW-AIEAGYRHIDTAAVYG---DEEQVGQGIAEA 295
+P + G A + ++ QAV A + G D++ +YG +EE +G+
Sbjct: 13 VPAIGFGCMGLHAMYGPSSEEANQAVLTHAADLGCTFWDSSDMYGFGANEECIGRWF--- 69
Query: 296 IAKGLVTREDLFITTKLWNDKHAR-GQ---------VVPTLRESLQRLGLDYVDLYLIH 442
K R+++F+ TK +K+ G+ + L SL+RLG+D +DLY +H
Sbjct: 70 --KQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVH 126
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 26.6 bits (56), Expect = 2.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -3
Query: 224 RLRSPKTQPALLDPTCQIQRQFLGRYPMP 138
R+ P +QPAL+ P ++ +G YP+P
Sbjct: 275 RVSIPGSQPALVTPKHKMNVPPMGMYPLP 303
>SPBC215.11c |||aldo/keto reductase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 306
Score = 25.4 bits (53), Expect = 5.0
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Frame = +2
Query: 218 EAGYRHIDTAAVYGDEEQVGQGIAEAIA--KGLV--TREDLFIT-TKLWNDKHARGQVVP 382
E IDTA YG E + EA+ KGL+ T+ L T W+ A +
Sbjct: 59 ELNINFIDTADSYGPEVSENL-LREALYPYKGLIIATKGGLVRTGPNEWHPCGAPKFLRQ 117
Query: 383 TLRESLQRLGLDYVDLYLIH 442
+ S++RLG+ +DL+ +H
Sbjct: 118 EVLMSMRRLGVKQIDLWQLH 137
>SPBC1347.01c |rev1|SPBC215.16c|deoxycytidyl transferase Rev1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 935
Score = 25.0 bits (52), Expect = 6.6
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 386 LRESLQRLGLDYVDLYLIHFPISSKADGSP 475
L E L R+G V L+ I I +ADG+P
Sbjct: 544 LHELLSRMGKCQVLLHQIQLRILKRADGAP 573
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,163,303
Number of Sequences: 5004
Number of extensions: 42089
Number of successful extensions: 116
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 204242806
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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