BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E19
(552 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein. 33 0.50
BC110497-1|AAI10498.1| 695|Homo sapiens splicing factor, argini... 33 0.50
BC110496-1|AAI10497.1| 695|Homo sapiens splicing factor, argini... 33 0.50
AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open... 33 0.50
BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S. cerev... 32 1.2
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 31 2.0
AL669841-1|CAI14619.1| 187|Homo sapiens novel protein protein. 31 2.0
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 31 2.0
AL359957-1|CAI16214.1| 187|Homo sapiens novel protein protein. 31 2.0
AL157709-1|CAI39593.1| 187|Homo sapiens novel protein protein. 31 2.0
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 30 4.7
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 30 4.7
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 30 4.7
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 30 4.7
Z83822-1|CAI42541.1| 823|Homo sapiens PHD finger protein 16 pro... 29 8.2
D86969-1|BAA13205.2| 857|Homo sapiens KIAA0215 protein. 29 8.2
BC114487-1|AAI14488.1| 823|Homo sapiens PHD finger protein 16 p... 29 8.2
BC113880-1|AAI13881.1| 823|Homo sapiens PHD finger protein 16 p... 29 8.2
BC064414-1|AAH64414.1| 157|Homo sapiens Unknown (protein for IM... 29 8.2
AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-l... 29 8.2
AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase p... 29 8.2
AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase p... 29 8.2
AF127774-1|AAD51905.1| 823|Homo sapiens unknown protein. 29 8.2
AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein. 29 8.2
>L03426-1|AAA61304.1| 695|Homo sapiens XE7 protein.
Length = 695
Score = 33.5 bits (73), Expect = 0.50
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 484 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 329
ST+P R S +S+ RHR E S +R G+ + RRS RS S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688
>BC110497-1|AAI10498.1| 695|Homo sapiens splicing factor,
arginine/serine-rich 17A protein.
Length = 695
Score = 33.5 bits (73), Expect = 0.50
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 484 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 329
ST+P R S +S+ RHR E S +R G+ + RRS RS S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688
>BC110496-1|AAI10497.1| 695|Homo sapiens splicing factor,
arginine/serine-rich 17A protein.
Length = 695
Score = 33.5 bits (73), Expect = 0.50
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 484 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 329
ST+P R S +S+ RHR E S +R G+ + RRS RS S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688
>AL683807-2|CAI41501.1| 695|Homo sapiens chromosome X and Y open
reading frame 3 protein.
Length = 695
Score = 33.5 bits (73), Expect = 0.50
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = -3
Query: 484 STTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSEWASTSR 329
ST+P R S +S+ RHR E S +R G+ + RRS RS S SR
Sbjct: 638 STSPDHTR-SRRSHSKDRHRRERSRERRGSASRKHSRHRRRSERSRSRSPSR 688
>BC006350-1|AAH06350.1| 619|Homo sapiens BUD13 homolog (S.
cerevisiae) protein.
Length = 619
Score = 32.3 bits (70), Expect = 1.2
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = -3
Query: 526 GLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPD 407
G S R +HD+ PS PR+ R S+D S PR SPD
Sbjct: 212 GASPRRVRHDSPDPSP-PRRARHGSSDISSPRRVHNNSPD 250
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 209 TPLRPKPA*PNPARICSLWSPESREALNKVTLLVAL 316
TP P P P PA +CS SPE R+ + LL+ L
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQWEEQGELLLPL 103
>AL669841-1|CAI14619.1| 187|Homo sapiens novel protein protein.
Length = 187
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNR 371
LFY GV +L + + PS+ R R+ S+ + R+R++V + + A K R
Sbjct: 103 LFYFRFGVDQALPQERRAPVTPSSASRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKER 162
Query: 370 PRRSP 356
P
Sbjct: 163 KMAVP 167
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 31.5 bits (68), Expect = 2.0
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 209 TPLRPKPA*PNPARICSLWSPESREALNKVTLLVAL 316
TP P P P PA +CS SPE R+ + LL+ L
Sbjct: 68 TPTPPTPVLPGPASLCSPASPELRQWEEQGELLLPL 103
>AL359957-1|CAI16214.1| 187|Homo sapiens novel protein protein.
Length = 187
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNR 371
LFY GV +L + + PS+ R R+ S+ + R+R++V + + A K R
Sbjct: 103 LFYFRFGVDQALPQERRAPVTPSSASRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKER 162
Query: 370 PRRSP 356
P
Sbjct: 163 KMAVP 167
>AL157709-1|CAI39593.1| 187|Homo sapiens novel protein protein.
Length = 187
Score = 31.5 bits (68), Expect = 2.0
Identities = 18/65 (27%), Positives = 30/65 (46%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNR 371
LFY GV +L + + PS+ R R+ S+ + R+R++V + + A K R
Sbjct: 103 LFYFRFGVDQALPQERRAPVTPSSASRYHRRRSSGSRDERYRSDVHTEAVQAALAKHKER 162
Query: 370 PRRSP 356
P
Sbjct: 163 KMAVP 167
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 30.3 bits (65), Expect = 4.7
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 187 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQSD 300
P++G+ A++AEA+L+ES + + VEP G +Q +
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQKE 236
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 30.3 bits (65), Expect = 4.7
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 187 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQSD 300
P++G+ A++AEA+L+ES + + VEP G +Q +
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQKE 236
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 30.3 bits (65), Expect = 4.7
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 187 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQSD 300
P++G+ A++AEA+L+ES + + VEP G +Q +
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQKE 236
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 30.3 bits (65), Expect = 4.7
Identities = 14/38 (36%), Positives = 25/38 (65%)
Frame = +1
Query: 187 PSAGLCLNASKAEASLAESGKDMLTVEPRESGGSKQSD 300
P++G+ A++AEA+L+ES + + VEP G +Q +
Sbjct: 201 PTSGMA--AAEAEAALSESSEQEMEVEPARKGEEEQKE 236
>Z83822-1|CAI42541.1| 823|Homo sapiens PHD finger protein 16
protein.
Length = 823
Score = 29.5 bits (63), Expect = 8.2
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKN 374
LFY P + L L +P +TP R SST+ + H SPD +V H+++N
Sbjct: 532 LFYPPPRITLKLK-------MPKSTPEDHRNSSTETDQQPH----SPDSSSSV-HSIRN 578
>D86969-1|BAA13205.2| 857|Homo sapiens KIAA0215 protein.
Length = 857
Score = 29.5 bits (63), Expect = 8.2
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKN 374
LFY P + L L +P +TP R SST+ + H SPD +V H+++N
Sbjct: 566 LFYPPPRITLKLK-------MPKSTPEDHRNSSTETDQQPH----SPDSSSSV-HSIRN 612
>BC114487-1|AAI14488.1| 823|Homo sapiens PHD finger protein 16
protein.
Length = 823
Score = 29.5 bits (63), Expect = 8.2
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKN 374
LFY P + L L +P +TP R SST+ + H SPD +V H+++N
Sbjct: 532 LFYPPPRITLKLK-------MPKSTPEDHRNSSTETDQQPH----SPDSSSSV-HSIRN 578
>BC113880-1|AAI13881.1| 823|Homo sapiens PHD finger protein 16
protein.
Length = 823
Score = 29.5 bits (63), Expect = 8.2
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKN 374
LFY P + L L +P +TP R SST+ + H SPD +V H+++N
Sbjct: 532 LFYPPPRITLKLK-------MPKSTPEDHRNSSTETDQQPH----SPDSSSSV-HSIRN 578
>BC064414-1|AAH64414.1| 157|Homo sapiens Unknown (protein for
IMAGE:5745754) protein.
Length = 157
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 475 PRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSE 347
PR++R+SS+ S+ RHR D + A K+R R S E
Sbjct: 101 PRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGE 143
>AY679523-1|AAT74623.1| 1512|Homo sapiens cell division cycle 2-like
5 (cholinesterase-related cell division controller)
protein.
Length = 1512
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 475 PRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSE 347
PR++R+SS+ S+ RHR D + A K+R R S E
Sbjct: 198 PRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGE 240
>AJ297710-1|CAC10401.1| 1452|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1452
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 475 PRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSE 347
PR++R+SS+ S+ RHR D + A K+R R S E
Sbjct: 198 PRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGE 240
>AJ297709-1|CAC10400.1| 1512|Homo sapiens CDC2L5 protein kinase
protein.
Length = 1512
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 475 PRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSE 347
PR++R+SS+ S+ RHR D + A K+R R S E
Sbjct: 198 PRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGE 240
>AF127774-1|AAD51905.1| 823|Homo sapiens unknown protein.
Length = 823
Score = 29.5 bits (63), Expect = 8.2
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -3
Query: 550 LFYESPGVGLSLNRSQHDAALPSTTPRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKN 374
LFY P + L L +P +TP R SST+ + H SPD +V H+++N
Sbjct: 532 LFYPPPRITLKLK-------MPKSTPEDHRNSSTETDQQPH----SPDSSSSV-HSIRN 578
>AC072061-1|AAS07491.1| 784|Homo sapiens unknown protein.
Length = 784
Score = 29.5 bits (63), Expect = 8.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -3
Query: 475 PRQERKSSTDYSEPRHRTEVSPDRIGAVAHALKNRPRRSPRSE 347
PR++R+SS+ S+ RHR D + A K+R R S E
Sbjct: 198 PRRDRRSSSGRSKERHREHRRRDGQRGGSEASKSRSRHSHSGE 240
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,326,046
Number of Sequences: 237096
Number of extensions: 1888023
Number of successful extensions: 5019
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 4715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5015
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5477474182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -