Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E18
         (423 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021478-1|AAX33626.1|  422|Drosophila melanogaster AT01223p pro...    28   4.5  
AE014297-3821|AAF56482.2|  509|Drosophila melanogaster CG5071-PA...    28   4.5  
AE014297-3820|AAN14059.1|  680|Drosophila melanogaster CG5071-PB...    28   4.5  

>BT021478-1|AAX33626.1|  422|Drosophila melanogaster AT01223p
           protein.
          Length = 422

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 230 DSGLVAAAKHTPVHKK*NSTFCHLC 304
           +S L  +A+H  +H   NST+CH C
Sbjct: 40  ESFLATSAEHCFIHAMPNSTWCHNC 64


>AE014297-3821|AAF56482.2|  509|Drosophila melanogaster CG5071-PA,
           isoform A protein.
          Length = 509

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 230 DSGLVAAAKHTPVHKK*NSTFCHLC 304
           +S L  +A+H  +H   NST+CH C
Sbjct: 127 ESFLATSAEHCFIHAMPNSTWCHNC 151


>AE014297-3820|AAN14059.1|  680|Drosophila melanogaster CG5071-PB,
           isoform B protein.
          Length = 680

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 230 DSGLVAAAKHTPVHKK*NSTFCHLC 304
           +S L  +A+H  +H   NST+CH C
Sbjct: 127 ESFLATSAEHCFIHAMPNSTWCHNC 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,339,094
Number of Sequences: 53049
Number of extensions: 277905
Number of successful extensions: 801
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 775
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)