Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E16
(411 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein. 182 4e-46
BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a ... 182 4e-46
BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a ... 182 4e-46
BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein. 182 4e-46
BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a ... 182 4e-46
BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a ... 182 4e-46
BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a ... 182 4e-46
AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a ... 182 4e-46
AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a ... 180 2e-45
BC113699-1|AAI13700.1| 490|Homo sapiens ribosomal L1 domain con... 37 0.023
BC112228-1|AAI12229.1| 490|Homo sapiens ribosomal L1 domain con... 37 0.023
BC107782-1|AAI07783.1| 464|Homo sapiens RSL1D1 protein protein. 37 0.023
BC019069-1|AAH19069.2| 492|Homo sapiens RSL1D1 protein protein. 37 0.023
BC017899-1|AAH17899.1| 308|Homo sapiens Unknown (protein for IM... 37 0.023
AY598331-1|AAT06742.1| 490|Homo sapiens L12 protein. 37 0.023
AY154473-1|AAN46298.1| 490|Homo sapiens cellular senescence inh... 37 0.023
AJ007398-1|CAA07491.1| 517|Homo sapiens PBK1 protein protein. 37 0.023
AF083127-1|AAF98239.1| 322|Homo sapiens unknown protein. 37 0.023
BC016362-1|AAH16362.1| 440|Homo sapiens Unknown (protein for IM... 33 0.28
Z97634-10|CAO77937.1| 233|Homo sapiens non-metastatic cells 4, ... 29 6.0
AL023881-7|CAO77957.1| 233|Homo sapiens non-metastatic cells 4,... 29 6.0
U43753-1|AAA98509.1| 171|Homo sapiens frataxin protein. 29 7.9
U43752-1|AAA98508.1| 210|Homo sapiens frataxin protein. 29 7.9
U43747-1|AAA98510.1| 210|Homo sapiens frataxin protein. 29 7.9
BC048097-1|AAH48097.1| 210|Homo sapiens frataxin protein. 29 7.9
BC023633-1|AAH23633.1| 210|Homo sapiens frataxin protein. 29 7.9
AL162730-2|CAH71829.1| 210|Homo sapiens frataxin protein. 29 7.9
>U12404-1|AAA86463.1| 217|Homo sapiens Csa-19 protein.
Length = 217
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BT020041-1|AAV38844.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BT020040-1|AAV38843.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BC116456-1|AAI16457.1| 206|Homo sapiens RPL10A protein protein.
Length = 206
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 102 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 161
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 162 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 206
>BC070216-1|AAH70216.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BC011366-1|AAH11366.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>BC006791-1|AAH06791.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>AL022721-5|CAB38627.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 182 bits (443), Expect = 4e-46
Identities = 83/105 (79%), Positives = 95/105 (90%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KSTMG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSTMGKPQRLY 217
>AB082926-1|BAC16802.1| 217|Homo sapiens ribosomal protein L10a
protein.
Length = 217
Score = 180 bits (437), Expect = 2e-45
Identities = 82/105 (78%), Positives = 94/105 (89%)
Frame = +3
Query: 45 SESLIKQIPRLLGPGLNKAGKFPGLLSHQESMTQKIDEVKGTIKFQMKKVLCLSVAVGHV 224
SESLIKQIPR+LGPGLNKAGKFP LL+H E+M K+DEVK TIKFQMKKVLCL+VAVGHV
Sbjct: 113 SESLIKQIPRILGPGLNKAGKFPSLLTHNENMVAKVDEVKSTIKFQMKKVLCLAVAVGHV 172
Query: 225 DMTPDELAQNVHLSINFLVSLLKKHWQNVRSLHMKSTMGPPQRLY 359
MT DEL N+HL++NFLVSLLKK+WQNVR+L++KS MG PQRLY
Sbjct: 173 KMTDDELVYNIHLAVNFLVSLLKKNWQNVRALYIKSPMGKPQRLY 217
>BC113699-1|AAI13700.1| 490|Homo sapiens ribosomal L1 domain
containing 1 protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>BC112228-1|AAI12229.1| 490|Homo sapiens ribosomal L1 domain
containing 1 protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>BC107782-1|AAI07783.1| 464|Homo sapiens RSL1D1 protein protein.
Length = 464
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>BC019069-1|AAH19069.2| 492|Homo sapiens RSL1D1 protein protein.
Length = 492
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 167 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 224
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 225 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 257
>BC017899-1|AAH17899.1| 308|Homo sapiens Unknown (protein for
IMAGE:4251450) protein.
Length = 308
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AY598331-1|AAT06742.1| 490|Homo sapiens L12 protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AY154473-1|AAN46298.1| 490|Homo sapiens cellular senescence
inhibited gene protein protein.
Length = 490
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AJ007398-1|CAA07491.1| 517|Homo sapiens PBK1 protein protein.
Length = 517
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 223 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 255
>AF083127-1|AAF98239.1| 322|Homo sapiens unknown protein.
Length = 322
Score = 37.1 bits (82), Expect = 0.023
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 90 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 147
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ L L + W++V+ L +K+
Sbjct: 148 IEHIIENIVAVTKGLSEKLPEKWESVKLLFVKT 180
>BC016362-1|AAH16362.1| 440|Homo sapiens Unknown (protein for
IMAGE:4107571) protein.
Length = 440
Score = 33.5 bits (73), Expect = 0.28
Identities = 23/93 (24%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Frame = +3
Query: 66 IPRLLGPGLNKAGKFP---GLLSHQESMTQKIDE-VKGTIKFQMKKVLCLSVAVGHVDMT 233
+P L+G + K P LLS ++++++I++ + GT+ K C ++ +GHV M
Sbjct: 165 LPSLIGRHFYQRKKVPVSVNLLS--KNLSREINDCIGGTVLNISKSGSCSAIRIGHVGMQ 222
Query: 234 PDELAQNVHLSINFLVSLLKKHWQNVRSLHMKS 332
+ + +N+ +++ +S W++V+ L +K+
Sbjct: 223 IEHIIENI-VAVTKGLSEKLPEWESVKLLFVKT 254
>Z97634-10|CAO77937.1| 233|Homo sapiens non-metastatic cells 4,
protein expressed in protein.
Length = 233
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 73 VSLVLVSIRLASSLVSYPTRNP*HRKLMKSREPSNSK*RRCCACLWPS 216
+ L S L+ + +P+R P R S + S R CC WPS
Sbjct: 163 IQLWFQSSELSPTGAPWPSRRPTWRGTTVSPRTATSSARTCCGTKWPS 210
>AL023881-7|CAO77957.1| 233|Homo sapiens non-metastatic cells 4,
protein expressed in protein.
Length = 233
Score = 29.1 bits (62), Expect = 6.0
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +1
Query: 73 VSLVLVSIRLASSLVSYPTRNP*HRKLMKSREPSNSK*RRCCACLWPS 216
+ L S L+ + +P+R P R S + S R CC WPS
Sbjct: 163 IQLWFQSSELSPTGAPWPSRRPTWRGTTVSPRTATSSARTCCGTKWPS 210
>U43753-1|AAA98509.1| 171|Homo sapiens frataxin protein.
Length = 171
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 173 QIPNEEGVVPVCGRRSRRHDSR*TC-PKCAPFNQ 271
++P + P+CGRR R D TC P+ A NQ
Sbjct: 26 RVPRPAELAPLCGRRGLRTDIDATCTPRRASSNQ 59
>U43752-1|AAA98508.1| 210|Homo sapiens frataxin protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 173 QIPNEEGVVPVCGRRSRRHDSR*TC-PKCAPFNQ 271
++P + P+CGRR R D TC P+ A NQ
Sbjct: 26 RVPRPAELAPLCGRRGLRTDIDATCTPRRASSNQ 59
>U43747-1|AAA98510.1| 210|Homo sapiens frataxin protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 173 QIPNEEGVVPVCGRRSRRHDSR*TC-PKCAPFNQ 271
++P + P+CGRR R D TC P+ A NQ
Sbjct: 26 RVPRPAELAPLCGRRGLRTDIDATCTPRRASSNQ 59
>BC048097-1|AAH48097.1| 210|Homo sapiens frataxin protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 173 QIPNEEGVVPVCGRRSRRHDSR*TC-PKCAPFNQ 271
++P + P+CGRR R D TC P+ A NQ
Sbjct: 26 RVPRPAELAPLCGRRGLRTDIDATCTPRRASSNQ 59
>BC023633-1|AAH23633.1| 210|Homo sapiens frataxin protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 173 QIPNEEGVVPVCGRRSRRHDSR*TC-PKCAPFNQ 271
++P + P+CGRR R D TC P+ A NQ
Sbjct: 26 RVPRPAELAPLCGRRGLRTDIDATCTPRRASSNQ 59
>AL162730-2|CAH71829.1| 210|Homo sapiens frataxin protein.
Length = 210
Score = 28.7 bits (61), Expect = 7.9
Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 173 QIPNEEGVVPVCGRRSRRHDSR*TC-PKCAPFNQ 271
++P + P+CGRR R D TC P+ A NQ
Sbjct: 26 RVPRPAELAPLCGRRGLRTDIDATCTPRRASSNQ 59
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,181,571
Number of Sequences: 237096
Number of extensions: 1190178
Number of successful extensions: 2284
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2283
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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