Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E15
(354 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein. 23 0.70
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.2
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.2
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.2
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.2
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 1.2
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 22 1.6
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 2.1
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 2.1
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 2.8
AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein. 21 4.9
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 4.9
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 20 6.5
DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory pro... 20 6.5
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 20 6.5
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 20 8.6
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 20 8.6
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept... 20 8.6
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 20 8.6
>AY453651-1|AAR89057.1| 199|Tribolium castaneum serrate protein.
Length = 199
Score = 23.4 bits (48), Expect = 0.70
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +1
Query: 19 DGACCELKNEICSAGYCQFIGNFVNKL 99
+GA C + + CS C+ G+ V+++
Sbjct: 99 EGALCNINTDDCSPNPCRNNGSCVDRI 125
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 287 KPFSNEGKPLVVQFSVKHEQDI 352
+P +NE +PL V+F + +Q I
Sbjct: 20 RPVANESEPLEVKFGLTLQQII 41
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 287 KPFSNEGKPLVVQFSVKHEQDI 352
+P +NE +PL V+F + +Q I
Sbjct: 20 RPVANESEPLEVKFGLTLQQII 41
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 287 KPFSNEGKPLVVQFSVKHEQDI 352
+P +NE +PL V+F + +Q I
Sbjct: 20 RPVANESEPLEVKFGLTLQQII 41
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 287 KPFSNEGKPLVVQFSVKHEQDI 352
+P +NE +PL V+F + +Q I
Sbjct: 20 RPVANESEPLEVKFGLTLQQII 41
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 1.2
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 287 KPFSNEGKPLVVQFSVKHEQDI 352
+P +NE +PL V+F + +Q I
Sbjct: 20 RPVANESEPLEVKFGLTLQQII 41
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 22.2 bits (45), Expect = 1.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 141 SHESSENFSSKNTSQFIDEIANK 73
S E S FSSK + +DE++ K
Sbjct: 153 SLEKSGLFSSKTSEHSVDELSGK 175
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 2.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 345 CSCFTLNCTTKG 310
CS + +NCT KG
Sbjct: 222 CSLWFINCTAKG 233
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 2.1
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 345 CSCFTLNCTTKG 310
CS + +NCT KG
Sbjct: 222 CSLWFINCTAKG 233
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.4 bits (43), Expect = 2.8
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +1
Query: 46 EICSAGYCQFI 78
E+C+AGY FI
Sbjct: 292 EVCNAGYLPFI 302
>AY531877-1|AAT08872.1| 247|Tribolium castaneum ORF1p protein.
Length = 247
Score = 20.6 bits (41), Expect = 4.9
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -2
Query: 272 GRRTSRLQMSVNLYPPLRHCRTFQ 201
G T ++ + YPP+ +C+ Q
Sbjct: 31 GLDTEEIKDLLQKYPPIANCKLVQ 54
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 20.6 bits (41), Expect = 4.9
Identities = 8/26 (30%), Positives = 13/26 (50%)
Frame = +1
Query: 22 GACCELKNEICSAGYCQFIGNFVNKL 99
G CE+ + C G C G ++K+
Sbjct: 254 GYICEINVDDCRPGACHNNGTCLDKV 279
Score = 19.8 bits (39), Expect = 8.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +1
Query: 46 EICSAGYCQFIGN 84
++C+ G C+ IGN
Sbjct: 154 KLCNNGTCEDIGN 166
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 20.2 bits (40), Expect = 6.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 152 PNLIPMNRLRIFPQRT 105
P L PM+ L +P RT
Sbjct: 477 PQLSPMSSLPPYPNRT 492
>DQ855505-1|ABH88192.1| 119|Tribolium castaneum chemosensory
protein 19 protein.
Length = 119
Score = 20.2 bits (40), Expect = 6.5
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -3
Query: 46 HFLIHSKHRLYQSL 5
HFL H+K ++++ L
Sbjct: 86 HFLSHNKQQMWKEL 99
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 20.2 bits (40), Expect = 6.5
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = -1
Query: 153 TQFDSHESSENFSSKNTSQFIDEIANK 73
T D+H E+F K FI + K
Sbjct: 49 TSGDTHLGGEDFDQKVMDYFIKMVKQK 75
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 19.8 bits (39), Expect = 8.6
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 31 CELKNEICSAG 63
C++K+ +CS G
Sbjct: 143 CDVKSSVCSPG 153
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 19.8 bits (39), Expect = 8.6
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 31 CELKNEICSAG 63
C++K+ +CS G
Sbjct: 143 CDVKSSVCSPG 153
>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
candidate 46 protein.
Length = 1451
Score = 19.8 bits (39), Expect = 8.6
Identities = 8/29 (27%), Positives = 15/29 (51%)
Frame = -3
Query: 238 TFIRLCVIVELSSSQFELAEFFSGVFTIY 152
T LCV+++L + + + V T+Y
Sbjct: 890 TIFALCVVLQLQENDWLQLGYLIFVSTLY 918
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 19.8 bits (39), Expect = 8.6
Identities = 5/11 (45%), Positives = 9/11 (81%)
Frame = +1
Query: 31 CELKNEICSAG 63
C++K+ +CS G
Sbjct: 143 CDVKSSVCSPG 153
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,244
Number of Sequences: 336
Number of extensions: 1634
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 7087595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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