Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E15
(354 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 95 2e-20
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 88 2e-18
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 86 7e-18
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 85 1e-17
06_03_1219 - 28491185-28494415 29 1.1
11_06_0110 + 20212221-20214011,20214072-20214368 28 1.8
03_02_0389 - 8036575-8036841,8037011-8037133,8037516-8037736,803... 28 2.4
08_02_1620 - 28288152-28288353,28288469-28288557,28288634-282888... 27 3.2
04_03_0051 + 10199702-10199839,10199869-10200642,10202481-102030... 27 3.2
12_01_0423 + 3337401-3337419,3337777-3338235,3338650-3338735,333... 27 4.2
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 27 4.2
06_03_1217 - 28484007-28487237 27 4.2
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555... 27 4.2
11_04_0443 - 17808897-17809110,17809169-17813652 27 5.6
09_01_0088 + 1268120-1268139,1268288-1268361,1268500-1268750,126... 27 5.6
06_03_1220 - 28505306-28508497 27 5.6
02_05_0792 - 31777775-31778220,31778506-31778630,31778724-317789... 27 5.6
01_01_0796 + 6190931-6192745 26 7.4
12_02_1131 - 26358339-26360609 26 9.8
11_06_0348 - 22561589-22563656,22563788-22564602 26 9.8
09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166 26 9.8
01_01_0733 - 5715719-5715785,5715908-5715966,5717844-5717884,571... 26 9.8
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 94.7 bits (225), Expect = 2e-20
Identities = 49/86 (56%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Frame = +2
Query: 101 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 274
EVFF+EKF +D WES WV SE E G++ T+GK+ D E DKG+QTSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPE-DKGIQTSEDYRFYAI 87
Query: 275 SRKFKPFSNEGKPLVVQFSVKHEQDI 352
S ++ FSN+ K LV+QFSVKHEQ +
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKL 113
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 88.2 bits (209), Expect = 2e-18
Identities = 45/86 (52%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Frame = +2
Query: 101 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 274
EV FEE+F +D WES WV S+ E G FK TAG++ D + DKG+QT+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDPD-DKGIQTTLDARHFAI 85
Query: 275 SRKFKPFSNEGKPLVVQFSVKHEQDI 352
S K FSN+G+ LV+Q+S+K EQDI
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDI 111
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 86.2 bits (204), Expect = 7e-18
Identities = 52/122 (42%), Positives = 69/122 (56%), Gaps = 13/122 (10%)
Frame = +2
Query: 26 LAVN*KMKSAVXXXXXXXXXXXXNCEVFFEEKFSDDSWESNWVYSE--HPGKEFGKFKLT 199
+A+ + +AV EVFF+EKF DD WE WV SE G++ T
Sbjct: 1 MAIPRRSAAAVAAVVALASVAAVAGEVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHT 59
Query: 200 AGKFYNDAEADKGL-----------QTSEDARFYALSRKFKPFSNEGKPLVVQFSVKHEQ 346
+GK+Y DA+ DKG+ QTSED RFYA+S K+ FS++ K LV+QFSVKHEQ
Sbjct: 60 SGKWYGDAD-DKGMCEVTLLLCAGIQTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQ 118
Query: 347 DI 352
+
Sbjct: 119 KL 120
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 85.4 bits (202), Expect = 1e-17
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Frame = +2
Query: 101 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 274
EV FEE+F DD W S WV S+ E G FK TAG + D + D+G+QT+ DA+ +A+
Sbjct: 28 EVIFEERFDDD-WGSRWVKSDWKKSEGKAGTFKHTAGSYSGDPD-DRGIQTTSDAKHFAI 85
Query: 275 SRKFKPFSNEGKPLVVQFSVKHEQDI 352
S KF FSN+ + LVVQ+S+K EQDI
Sbjct: 86 SAKFPEFSNKNRTLVVQYSIKIEQDI 111
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -1
Query: 168 GCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIAST 55
G SL+ S ++N SSK+T F+ E+A + A A T
Sbjct: 741 GASLFDSMSSELYNDNDSSKDTIFFMSEVAGEAAKAVT 778
>11_06_0110 + 20212221-20214011,20214072-20214368
Length = 695
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = -1
Query: 354 SMSCSCFTLNCT--TKGLPSLLNGLNFLDRA*NLASSDVCKPLSASASL*NFPAVNLNLP 181
+MS L+C +P + L LD + NL S DV + + L N L
Sbjct: 527 NMSLEKLYLDCNHIADRIPRMPRNLMLLDISYNLISGDVPQSICELQKLNGLDLSNNLLE 586
Query: 180 NSFPGCSLYTQ 148
FP CSL ++
Sbjct: 587 GEFPQCSLMSR 597
>03_02_0389 -
8036575-8036841,8037011-8037133,8037516-8037736,
8037788-8037812,8038344-8038445,8038556-8038951,
8039647-8039699,8039813-8039897,8040220-8040370,
8040457-8040464
Length = 476
Score = 27.9 bits (59), Expect = 2.4
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 194 LTAGKFYNDAEADKGLQTSEDARFYALSRKFK-PFSNEGKPLVVQFSV 334
L AG + + GL S ARFYA+ R + S++ VQFSV
Sbjct: 12 LVAGGYLVLERPNAGLVLSTSARFYAIVRPLRDELSHDSWAWAVQFSV 59
>08_02_1620 - 28288152-28288353,28288469-28288557,28288634-28288828,
28289082-28289423,28290227-28291672,28292590-28292666,
28293160-28294509,28295921-28296029,28296896-28297007,
28297800-28297957
Length = 1359
Score = 27.5 bits (58), Expect = 3.2
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Frame = -1
Query: 261 LASSDVCKPLSASASL*NFPAVNLNLPNSFPGCS--LYTQF-DSHESSENFSSKNTSQF 94
+A S K + ASA + + + +P S+P CS L +F D +S++ S+K S+F
Sbjct: 1248 VAVSPSLKSMFASAQMSPILPLRVLVPASYPKCSPVLLDKFPDEQRNSDDLSTKARSKF 1306
>04_03_0051 +
10199702-10199839,10199869-10200642,10202481-10203077,
10237046-10237159
Length = 540
Score = 27.5 bits (58), Expect = 3.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 191 KLTAGKFYNDAEADKGLQTSEDARFYALSRKF 286
++ AGK Y E D +T E ARF + R++
Sbjct: 187 RMVAGKQYYGGEGDAEAETEEAARFREMVREY 218
>12_01_0423 +
3337401-3337419,3337777-3338235,3338650-3338735,
3338974-3339022,3339225-3339533,3339555-3339710,
3339871-3340086,3340404-3340906,3341050-3341116,
3341215-3341272,3341561-3341699,3341840-3341956,
3342069-3342246,3342459-3343093
Length = 996
Score = 27.1 bits (57), Expect = 4.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = -1
Query: 189 NLPNSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIASTADF 46
N PN+FP S F + S F S S + I++ A AS++ F
Sbjct: 457 NPPNAFPSASANNPFAPKQPSTGFGS--ISSVFNSISSNTAPASSSPF 502
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = -1
Query: 327 NCTTKGLPSLLNGLNFLDRA*NLASSDVCKPLSASASL*NFPAVNLNLPNSFPGCSL 157
N + G+P L GLNFL +++++++ P+ +S L FP + N G L
Sbjct: 748 NQLSGGIPPGLGGLNFLADF-DVSNNNLTGPIPSSGQLTTFPPSRYDNNNGLCGIPL 803
>06_03_1217 - 28484007-28487237
Length = 1076
Score = 27.1 bits (57), Expect = 4.2
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = -1
Query: 327 NCTTKGLPSLLNGLNFLDRA*NLASSDVCKPLSASASL*NFPAVN 193
N T +PS LN LNFL N+A +D+ P+ FP N
Sbjct: 623 NRLTGTIPSALNKLNFL-AVFNVAHNDLEGPIPTGGQFDAFPPKN 666
>01_07_0112 -
41149461-41151674,41151688-41153265,41154344-41155507,
41155807-41156293,41156603-41156759,41157303-41157378
Length = 1891
Score = 27.1 bits (57), Expect = 4.2
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -1
Query: 354 SMSCSCFTLNCTTKGLPS-LLNGLNFLDRA 268
S +CSC TT LPS L +GLN+++ A
Sbjct: 70 SWTCSCGLWKATTHHLPSALCHGLNYVNCA 99
>11_04_0443 - 17808897-17809110,17809169-17813652
Length = 1565
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Frame = -1
Query: 210 NFPAVNLNLPNSFPGCSLYTQFDSHESSENFSSKNTS---QFIDEIANK 73
NF VNL +PN YT E +N+ + S F+D+I K
Sbjct: 1086 NFVIVNLKIPNDQSAVPAYTVLSLLECIQNWIACQVSLPKDFLDKICKK 1134
>09_01_0088 +
1268120-1268139,1268288-1268361,1268500-1268750,
1268845-1269048,1269488-1269805,1269893-1269910
Length = 294
Score = 26.6 bits (56), Expect = 5.6
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +2
Query: 113 EEKFSDDSWESNWVYSEHPGK-EFGKFKLTAGKFYNDAEADKGLQT 247
E KF+ D +NW+ + GK K KL G + + ++ LQT
Sbjct: 115 ERKFAIDGRANNWILHQLDGKLRQYKSKLKKGYYKPNLPMERALQT 160
>06_03_1220 - 28505306-28508497
Length = 1063
Score = 26.6 bits (56), Expect = 5.6
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 327 NCTTKGLPSLLNGLNFLDRA*NLASSDVCKPLSASASL*NFP 202
N T +PS LN LNFL N+A +D+ P+ FP
Sbjct: 615 NLLTGTIPSALNKLNFL-AVFNVAHNDLEGPIPTGGQFDAFP 655
>02_05_0792 -
31777775-31778220,31778506-31778630,31778724-31778911,
31779716-31779892
Length = 311
Score = 26.6 bits (56), Expect = 5.6
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = -2
Query: 251 QMSVNLYPPLRHCRTFQQSI*TCRILFRGVHYIPNLIPMN---RLRIFPQRTLHNL 93
++ +L+P +RH + SI I G+H P L +N R+R RT+ +L
Sbjct: 100 EILASLFPSIRHFAFEESSIRPSIISRYGIHGFPTLFLLNSTMRVRYHGPRTVKSL 155
>01_01_0796 + 6190931-6192745
Length = 604
Score = 26.2 bits (55), Expect = 7.4
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 89 TKLPINWQ*PALQISFFNSQQAPSLSKP 6
T LP+ Q P +Q F S QAP L+ P
Sbjct: 374 THLPLQVQAPFMQEPFLFSDQAPVLAPP 401
>12_02_1131 - 26358339-26360609
Length = 756
Score = 25.8 bits (54), Expect = 9.8
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 152 PNLIPMNRLRIFPQRTLHNLLTK 84
P+L+ MN+L ++ Q LH + TK
Sbjct: 206 PDLVHMNKLAVYAQGHLHWITTK 228
>11_06_0348 - 22561589-22563656,22563788-22564602
Length = 960
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 167 PGKEFGKFKLTAGKFYNDAEADKGLQ 244
P K +FK+TAGKF N + +GL+
Sbjct: 737 PPKFLDEFKVTAGKFANVPQWIEGLE 762
>09_02_0257 + 6355876-6356444,6356690-6357136,6357231-6359166
Length = 983
Score = 25.8 bits (54), Expect = 9.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2
Query: 131 DSWESNWVYSEHPGKEFGKFK 193
D W+S+W Y+ P K F+
Sbjct: 157 DDWKSDWFYTPSPTKRASDFR 177
>01_01_0733 -
5715719-5715785,5715908-5715966,5717844-5717884,
5718086-5718134,5718427-5718559,5719303-5719384,
5719990-5720472,5720612-5721024,5721260-5721419,
5721541-5721665,5721756-5721811,5721831-5721889,
5722069-5722180,5722952-5723032
Length = 639
Score = 25.8 bits (54), Expect = 9.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 272 LSRKFKPFSNEGKPLVVQFSVKHEQDI 352
LSR F SN+ K L+ +F KH D+
Sbjct: 90 LSRNFSVSSNDSKRLLQEFVNKHGADL 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,435,911
Number of Sequences: 37544
Number of extensions: 172673
Number of successful extensions: 556
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 530315984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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