Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E15
(354 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to calr... 91 1e-19
At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to SP|Q... 91 2e-19
At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to simi... 79 6e-16
At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to simi... 79 6e-16
At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing p... 29 0.89
At1g58210.1 68414.m06610 kinase interacting family protein simil... 28 1.6
At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase fam... 28 1.6
At5g04710.1 68418.m00480 aspartyl aminopeptidase, putative simil... 27 3.6
At2g07280.1 68415.m00835 hypothetical protein 27 4.7
At1g75420.1 68414.m08761 glycosyl transferase family 1 protein c... 27 4.7
At1g25230.1 68414.m03131 purple acid phosphatase family protein ... 27 4.7
At5g33380.1 68418.m03963 hypothetical protein 26 8.3
At2g47960.1 68415.m05999 expressed protein 26 8.3
At1g63820.1 68414.m07222 hypothetical protein 26 8.3
>At1g56340.1 68414.m06476 calreticulin 1 (CRT1) identical to
calreticulin (crt1) GI:2052379 [Arabidopsis thaliana]
Length = 425
Score = 91.5 bits (217), Expect = 1e-19
Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +2
Query: 95 NCEVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFY 268
+ EV FEEKF +D WE WV S+ + G++K TAG + DA DKG+QTSED RFY
Sbjct: 21 SAEVIFEEKF-EDGWEKRWVKSDWKKDDNTAGEWKHTAGNWSGDAN-DKGIQTSEDYRFY 78
Query: 269 ALSRKFKPFSNEGKPLVVQFSVKHEQDI 352
A+S +F FSN+ K LV QFSVKHEQ +
Sbjct: 79 AISAEFPEFSNKDKTLVFQFSVKHEQKL 106
>At1g09210.1 68414.m01028 calreticulin 2 (CRT2) identical to
SP|Q38858 Calreticulin 2 precursor {Arabidopsis
thaliana}
Length = 424
Score = 91.1 bits (216), Expect = 2e-19
Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Frame = +2
Query: 104 VFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYALS 277
V FEE+F DD WE+ WV SE + G++K TAG + DA DKG+QTSED RFYA+S
Sbjct: 24 VIFEERF-DDGWENRWVKSEWKKDDNTAGEWKHTAGNWSGDAN-DKGIQTSEDYRFYAIS 81
Query: 278 RKFKPFSNEGKPLVVQFSVKHEQDI 352
+F FSN+ K LV QFSVKHEQ +
Sbjct: 82 AEFPEFSNKDKTLVFQFSVKHEQKL 106
>At1g08450.2 68414.m00935 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 370
Score = 79.4 bits (187), Expect = 6e-16
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 101 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 274
E+F EE F + W+S WV S+ E G FK TAGK+ D + +KG+QT DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPD-NKGIQTYNDAKHYAI 86
Query: 275 SRKFKPFSNEGKPLVVQFSVKHEQDI 352
S K FSN+ + LVVQ+SVK EQDI
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDI 112
>At1g08450.1 68414.m00934 calreticulin 3 (CRT3) identical to similar
to SP|O04153 Calreticulin 3 precursor {Arabidopsis
thaliana}
Length = 424
Score = 79.4 bits (187), Expect = 6e-16
Identities = 43/86 (50%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +2
Query: 101 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 274
E+F EE F + W+S WV S+ E G FK TAGK+ D + +KG+QT DA+ YA+
Sbjct: 29 EIFLEEHF-EGGWKSRWVLSDWKRNEGKAGTFKHTAGKWPGDPD-NKGIQTYNDAKHYAI 86
Query: 275 SRKFKPFSNEGKPLVVQFSVKHEQDI 352
S K FSN+ + LVVQ+SVK EQDI
Sbjct: 87 SAKIPEFSNKNRTLVVQYSVKIEQDI 112
>At5g08430.1 68418.m00993 SWIB complex BAF60b domain-containing
protein / plus-3 domain-containing protein / GYF
domain-containing protein similar to CPRF interacting
protein [Petroselinum crispum] GI:9588690; contains Pfam
profiles PF02201: BAF60b domain of the SWIB complex,
PF03126: Plus-3 domain, PF02213: GYF domain; contains
non-conensus AT-AC splice sites at intron 5
Length = 553
Score = 29.1 bits (62), Expect = 0.89
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 125 SDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAE 226
S D + NW+Y + G G F LT K ++DAE
Sbjct: 492 SYDKEKLNWLYKDPQGLVQGPFSLTQLKAWSDAE 525
>At1g58210.1 68414.m06610 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) {Petunia
integrifolia}
Length = 1246
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 218 DAEADKGLQTSEDARFYALSRKF-KPFSN 301
+AE +KG T+ RFYAL KF KP S+
Sbjct: 583 EAEIEKGRITTAKERFYALRNKFEKPESD 611
>At1g53500.1 68414.m06066 NAD-dependent epimerase/dehydratase family
protein low similarity to dTDP-D-glucose-4,6-dehydratase
from Aneurinibacillus thermoaerophilus GI:16357461,
Sphingomonas sp. GI:1314581; contains Pfam profile
PF01370: NAD dependent epimerase/dehydratase family;
putative NDP-rhamnose synthase (rhm2 gene) GI:31559258
Length = 667
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/63 (28%), Positives = 24/63 (38%)
Frame = -1
Query: 210 NFPAVNLNLPNSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIASTADFIF*FT 31
N+P + + + CS D SS NF D++ N L I D I F
Sbjct: 31 NYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIASDDLVNYLLITENIDTIMHFA 90
Query: 30 AST 22
A T
Sbjct: 91 AQT 93
>At5g04710.1 68418.m00480 aspartyl aminopeptidase, putative similar
to SP|Q9ULA0 Aspartyl aminopeptidase (EC 3.4.11.21)
{Homo sapiens}; contains Pfam profile PF02127:
Aminopeptidase I zinc metalloprotease (M18)
Length = 526
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = -1
Query: 189 NLPNSFPGCSLYTQFDSHESSENFSSKNTSQFI 91
NL +SF C+L DS ESSEN S+++ + I
Sbjct: 311 NLASSF--CALRALIDSCESSENLSTEHDIRMI 341
>At2g07280.1 68415.m00835 hypothetical protein
Length = 401
Score = 26.6 bits (56), Expect = 4.7
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 107 FFEEKFSDDSWESNWVYSEHP 169
F E F D+ E +W + EHP
Sbjct: 210 FLRELFGKDTGEQDWTHFEHP 230
>At1g75420.1 68414.m08761 glycosyl transferase family 1 protein
contains Pfam glycosyl transferase, group 1 family
protein domain PF00534
Length = 463
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -1
Query: 180 NSFPGCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAI 64
+SF CS+ +QF ++ E+ ++K S +D + +KL +
Sbjct: 32 SSFETCSISSQFVEEKNGESSAAKFQSNPLDFMKSKLVL 70
>At1g25230.1 68414.m03131 purple acid phosphatase family protein
contains Pfam profile: PF00149 calcineurin-like
phosphoesterase; similar to purple acid phosphatase
(GI:20257479) [Arabidopsis thaliana]
Length = 339
Score = 26.6 bits (56), Expect = 4.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 62 PALQISFFNSQQAPSLSKP 6
PA Q+SF N +PSL KP
Sbjct: 99 PAFQLSFSNIYTSPSLQKP 117
>At5g33380.1 68418.m03963 hypothetical protein
Length = 154
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 353 RCPVRASH*TVPPKVCLHC*MA*ISSIG 270
R P R T+ P+V HC ISS G
Sbjct: 126 RVPTREKEQTISPRVSSHCARGSISSFG 153
>At2g47960.1 68415.m05999 expressed protein
Length = 442
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 161 EHPGKEFGKFKLTAGKFYNDAEADK 235
EH KE G L YNDA+ ++
Sbjct: 159 EHDVKELGAHTLVCSALYNDADGER 183
>At1g63820.1 68414.m07222 hypothetical protein
Length = 265
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = -1
Query: 234 LSASASL*NFPAVNLNLPNSFPGCSLYTQFDSHESSE-NFSSKNTSQFIDEIAN 76
LS+S + + L NSFP S + FD+ ++ + F+S + F+++ +N
Sbjct: 67 LSSSPPISQLQTLTLTHTNSFPNFSGFENFDTVKTEQLLFNSPFDAPFMEDSSN 120
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,763,234
Number of Sequences: 28952
Number of extensions: 146697
Number of successful extensions: 429
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 449370720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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