Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E12
         (490 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    24   0.85 
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    24   0.85 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   3.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   4.5  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   6.0  

>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 147 FKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTMKDIESID-----PEFYNSLVWIK 311
           FK+I +   MA Y G        + FYKR  + K  + ++ESI      P+  NS  W++
Sbjct: 106 FKYIDQ---MAGYTGFLAMLTSMVMFYKRSNDLKTLLSNLESIQIYSIKPKERNSNHWVR 162


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.8 bits (49), Expect = 0.85
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 147 FKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTMKDIESID-----PEFYNSLVWIK 311
           FK+I +   MA Y G        + FYKR  + K  + ++ESI      P+  NS  W++
Sbjct: 62  FKYIDQ---MAGYTGFLAMLTSMVMFYKRSNDLKTLLSNLESIQIYSIKPKERNSNHWVR 118


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 294 NCKTRDL*TRCPSSLAFCSTS 232
           NCK   +   C S + FC+TS
Sbjct: 325 NCKLGFMGRHCESKVNFCATS 345


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -2

Query: 114 RGLFANCNYSCSRTRIDNTWD 52
           RGLF N    CS    +NT D
Sbjct: 132 RGLFCNGEKDCSDGSDENTCD 152


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = +1

Query: 424 PESNKEQYLQVVTQWR 471
           P +N +QY+++  +W+
Sbjct: 433 PLTNPKQYMEIFARWK 448


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -3

Query: 398 FQFVVYHLTEHLEVNTEPHLETAFVYIVILYPN*RIVKLGIY 273
           F F+++ + E   ++    LET + +I +     R+V +  Y
Sbjct: 297 FYFIIFQVFESFYLHKATTLETVYYFISLGLLILRLVSVCFY 338


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,157
Number of Sequences: 336
Number of extensions: 2299
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11420693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)