Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0002_E12
         (490 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.          146   5e-37
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    25   1.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.2  
AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450 pr...    22   9.8  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score =  146 bits (353), Expect = 5e-37
 Identities = 71/156 (45%), Positives = 99/156 (63%), Gaps = 17/156 (10%)
 Frame = +3

Query: 9   VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASY-----------------VNPDH 137
           V+REW +LLSHE+LNP Y LF+Y+  ++YSLQINP SY                 +NP+H
Sbjct: 535 VAREWLYLLSHEMLNPQYGLFQYSRDDHYSLQINPDSYLKQRKTIHFFPVLFLAAINPEH 594

Query: 138 LLYFKFIGRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDN 317
           L YF F+GR + +A++H   +  GFT+PFYK++LNK +T+ DIE +DP+ + SL WI +N
Sbjct: 595 LSYFHFVGRILGIAVFHNHVLDGGFTLPFYKQLLNKPITLSDIEDVDPDLHRSLTWILEN 654

Query: 318 NIDECGLEMWFSVDFEVLGQVIHHELKPAGDKERVT 425
           NI    ++  FSV+    G +  HELKP G    VT
Sbjct: 655 NITGI-IDSTFSVENNSFGVLKVHELKPNGASIAVT 689


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -2

Query: 72   RIDNTWDSILHGIIKRTILD 13
            R D+T   +LHG++  T+L+
Sbjct: 1035 RFDSTRTELLHGVVPETLLE 1054


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 419  SLLVPGRFQFVVYHLTEHLEVNTEPHLE 336
            S+ VP     VV+H ++H  +  + HL+
Sbjct: 1590 SIAVPREGDMVVFHSSKHFSIWIDGHLK 1617


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 3.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -3

Query: 419  SLLVPGRFQFVVYHLTEHLEVNTEPHLE 336
            S+ VP     VV+H ++H  +  + HL+
Sbjct: 1591 SIAVPREGDMVVFHSSKHFSIWIDGHLK 1618


>AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450
           protein.
          Length = 158

 Score = 22.2 bits (45), Expect = 9.8
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = +3

Query: 87  NNYSLQINPASYVNPDHLLYFKFI--GRFI 170
           NNY L ++PA +  P+     +F+  GR +
Sbjct: 125 NNYDLSMSPALWDEPERFRPERFLQQGRLV 154


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 519,240
Number of Sequences: 2352
Number of extensions: 10586
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43131618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)