Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0002_E12
(490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 235 2e-62
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 235 2e-62
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 161 2e-40
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 120 6e-28
Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical pr... 78 4e-15
Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical pr... 78 4e-15
AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical ... 61 4e-10
AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP ubiquit... 61 4e-10
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical... 41 6e-04
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 32 0.26
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF047665-3|AAC04456.3| 566|Caenorhabditis elegans Hypothetical ... 29 2.4
U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine rec... 27 9.7
AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchang... 27 9.7
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 235 bits (574), Expect = 2e-62
Identities = 101/139 (72%), Positives = 121/139 (87%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYH 188
V+REWFFLLSHEVLNPMYCLF YA NNYSLQINPAS+VNPDHL YF++IGRFIAMAL+H
Sbjct: 481 VAREWFFLLSHEVLNPMYCLFMYAGNNNYSLQINPASFVNPDHLKYFEYIGRFIAMALFH 540
Query: 189 GRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDFEV 368
G+FIYSGFTMPFYK+MLNKK+ +KDIE +D E YNSL+WIKDNNIDEC +E++F D+E+
Sbjct: 541 GKFIYSGFTMPFYKKMLNKKIVLKDIEQVDSEIYNSLMWIKDNNIDECDMELYFVADYEL 600
Query: 369 LGQVIHHELKPAGDKERVT 425
LG++ +ELK G + VT
Sbjct: 601 LGELKTYELKEGGTEIAVT 619
Score = 31.1 bits (67), Expect = 0.45
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 406 GTRRE*PESNKEQYLQVVTQWRMTRGIE 489
GT E NK +Y++++ +WR RG+E
Sbjct: 613 GTEIAVTEENKLEYIELLVEWRFNRGVE 640
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 235 bits (574), Expect = 2e-62
Identities = 101/139 (72%), Positives = 121/139 (87%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYH 188
V+REWFFLLSHEVLNPMYCLF YA NNYSLQINPAS+VNPDHL YF++IGRFIAMAL+H
Sbjct: 483 VAREWFFLLSHEVLNPMYCLFMYAGNNNYSLQINPASFVNPDHLKYFEYIGRFIAMALFH 542
Query: 189 GRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDFEV 368
G+FIYSGFTMPFYK+MLNKK+ +KDIE +D E YNSL+WIKDNNIDEC +E++F D+E+
Sbjct: 543 GKFIYSGFTMPFYKKMLNKKIVLKDIEQVDSEIYNSLMWIKDNNIDECDMELYFVADYEL 602
Query: 369 LGQVIHHELKPAGDKERVT 425
LG++ +ELK G + VT
Sbjct: 603 LGELKTYELKEGGTEIAVT 621
Score = 31.1 bits (67), Expect = 0.45
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 406 GTRRE*PESNKEQYLQVVTQWRMTRGIE 489
GT E NK +Y++++ +WR RG+E
Sbjct: 615 GTEIAVTEENKLEYIELLVEWRFNRGVE 642
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 161 bits (392), Expect = 2e-40
Identities = 76/140 (54%), Positives = 100/140 (71%), Gaps = 1/140 (0%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYV-NPDHLLYFKFIGRFIAMALY 185
V+REWFFLLSH++ NP Y LFEY+ +NY+LQINP S NP+HL YF FIGR I MA+Y
Sbjct: 435 VTREWFFLLSHQIFNPYYGLFEYSATDNYTLQINPHSEACNPEHLSYFHFIGRIIGMAIY 494
Query: 186 HGRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDFE 365
HG+ + + F PFYK ML KK+T+ D+ES+D E+YNSL+++KDN D LE+ FS+D
Sbjct: 495 HGKLLDAFFIRPFYKMMLGKKITLFDMESVDNEYYNSLIYVKDN--DPADLELTFSLDDS 552
Query: 366 VLGQVIHHELKPAGDKERVT 425
+ G+ + EL P G VT
Sbjct: 553 IFGETQNIELIPNGANVPVT 572
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 120 bits (289), Expect = 6e-28
Identities = 57/136 (41%), Positives = 84/136 (61%)
Frame = +3
Query: 15 REWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGR 194
REWF +++ E+ NP Y LF A + + IN ASY+NP+HL YFKF+GR IA +++ +
Sbjct: 3866 REWFSVITREIFNPNYALFITAPGDMVTYMINKASYINPEHLDYFKFVGRLIAKSVFEHK 3925
Query: 195 FIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDFEVLG 374
++ FT FYK +LN + +D+ES DP F+ SL ++ N ID+ L++ FS + E G
Sbjct: 3926 YLDCYFTRAFYKHILNLPVRYQDLESEDPAFFKSLDFLLQNPIDDLALDLTFSTEVEEFG 3985
Query: 375 QVIHHELKPAGDKERV 422
+LKP G K V
Sbjct: 3986 VRSVRDLKPNGRKIEV 4001
>Z46793-4|CAA86773.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 77.8 bits (183), Expect = 4e-15
Identities = 44/124 (35%), Positives = 67/124 (54%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYH 188
+SRE+F LLS E+ +P FEY N+Y LQ+ P + GR +A+A+ H
Sbjct: 565 LSREFFILLSRELFHPKNGYFEYEG-NDYHLQLRPRGCETEKEKKWLILCGRVLALAVIH 623
Query: 189 GRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDFEV 368
+I FT FYK + + +T+ D + D EFY S+ W+ +N++ + LEM F V
Sbjct: 624 RCYIDVFFTNVFYKSLQKRPVTLMDFKESDAEFYKSMNWLLENDVVD--LEMSFVYSSMV 681
Query: 369 LGQV 380
G+V
Sbjct: 682 NGKV 685
>Z34800-5|CAA84325.1| 889|Caenorhabditis elegans Hypothetical
protein F45H7.6 protein.
Length = 889
Score = 77.8 bits (183), Expect = 4e-15
Identities = 44/124 (35%), Positives = 67/124 (54%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYH 188
+SRE+F LLS E+ +P FEY N+Y LQ+ P + GR +A+A+ H
Sbjct: 565 LSREFFILLSRELFHPKNGYFEYEG-NDYHLQLRPRGCETEKEKKWLILCGRVLALAVIH 623
Query: 189 GRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDFEV 368
+I FT FYK + + +T+ D + D EFY S+ W+ +N++ + LEM F V
Sbjct: 624 RCYIDVFFTNVFYKSLQKRPVTLMDFKESDAEFYKSMNWLLENDVVD--LEMSFVYSSMV 681
Query: 369 LGQV 380
G+V
Sbjct: 682 NGKV 685
>AL023839-2|CAA19508.1| 1066|Caenorhabditis elegans Hypothetical
protein Y39A1C.2 protein.
Length = 1066
Score = 61.3 bits (142), Expect = 4e-10
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYH 188
V +E+ L +V +P LF + L +P S ++ DHL F F+GR + A+Y
Sbjct: 732 VFKEFLELTLKKVFDPQLNLFSTTSTG--VLYPSPTSSLHDDHLALFTFVGRMLGKAVYE 789
Query: 189 GRFIYSGFTMPFYKRML--NKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDF 362
G + +L ++ ++ +DPE Y SL ++K + L + FSVD
Sbjct: 790 GIVVDVQLAPVLLAAVLGSHRLCAFDELSQLDPELYRSLTFVKRYEGEMADLSLTFSVDE 849
Query: 363 EVLGQVIHHELKPAGDKERVT 425
+ +G++ +L P+G VT
Sbjct: 850 DFMGKISTVDLVPSGRTISVT 870
>AB006659-1|BAA21847.1| 655|Caenorhabditis elegans E6-AP
ubiquitin-protein ligase protein.
Length = 655
Score = 61.3 bits (142), Expect = 4e-10
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 2/141 (1%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYH 188
V +E+ L +V +P LF + L +P S ++ DHL F F+GR + A+Y
Sbjct: 320 VFKEFLELTLKKVFDPQLNLFSTTSTG--VLYPSPTSSLHDDHLALFTFVGRMLGKAVYE 377
Query: 189 GRFIYSGFTMPFYKRML--NKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFSVDF 362
G + +L ++ ++ +DPE Y SL ++K + L + FSVD
Sbjct: 378 GIVVDVQLAPVLLAAVLGSHRLCAFDELSQLDPELYRSLTFVKRYEGEMADLSLTFSVDE 437
Query: 363 EVLGQVIHHELKPAGDKERVT 425
+ +G++ +L P+G VT
Sbjct: 438 DFMGKISTVDLVPSGRTISVT 458
>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical protein
D2085.4 protein.
Length = 1001
Score = 45.2 bits (102), Expect = 3e-05
Identities = 34/103 (33%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Frame = +3
Query: 132 DHLLYFKFIGRFIAMALYHGRFIYSGFTMPFYKRML----NKKLTMKDIESIDPEFYNSL 299
D L +F+FIGR I +Y + F F ++ NK + ++ ++S DP + L
Sbjct: 727 DCLAHFQFIGRMIGKLIYERQLQEVRFAEFFIAQIFETDKNKDVDLQHMKSFDPIIFKHL 786
Query: 300 VWI-KDNNIDECGLEMWFSVDFEVLGQVIHHELKPAGDKERVT 425
+ K NN + L++ FSV +G V + LKP G K RVT
Sbjct: 787 KALQKMNNRELDELQLDFSVVTSDMGLVRNVNLKPNGSKFRVT 829
>AC025721-10|AAK29908.2| 1019|Caenorhabditis elegans Hypothetical
protein Y48G8AL.1 protein.
Length = 1019
Score = 40.7 bits (91), Expect = 6e-04
Identities = 32/144 (22%), Positives = 67/144 (46%), Gaps = 5/144 (3%)
Frame = +3
Query: 9 VSREWFFLLSHEVLNPMYCLFEYANKNNYSLQIN-PASYVNPDHLLYFKFIGRFIAMALY 185
V +E+F L+ ++L Y +F +++ P+ + + + F +GR + +++Y
Sbjct: 711 VRKEFFILVMRKILQSDYGMFSEDEESHLVWFSGLPSEFCDREQ---FHQLGRLVGLSIY 767
Query: 186 HGRFIYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWI----KDNNIDECGLEMWFS 353
+ + F + YK +L+ ++D+ + P L + +D+ D GL F
Sbjct: 768 NHSIVPFPFPLALYKYLLDTPPDLEDLCELSPSEGKGLKMLLSYEEDDVEDVFGLN--FC 825
Query: 354 VDFEVLGQVIHHELKPAGDKERVT 425
+ F +LG+ EL G ++ VT
Sbjct: 826 ISFNILGETHTTELLSGGTEKPVT 849
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 31.9 bits (69), Expect = 0.26
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +3
Query: 18 EWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRF 197
+W L+ E +P+ LFE A + + P L ++ +GR + + L G
Sbjct: 2643 QWNVLVGTE--SPLDQLFEKAPYGEF--YVPKIGNGAPMRLAAYRTVGRIMGICLSQGDI 2698
Query: 198 IYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFS-VDFEVLG 374
F+ + +L + D+ DP +N+L + + E L+ FS V+ G
Sbjct: 2699 FPLRFSRHIFSYILKLPICWLDLGFYDPVLFNNLRALFKAHPSE--LDTDFSIVEQSADG 2756
Query: 375 QVIHHELKPAGDK 413
+ + LKP GD+
Sbjct: 2757 KAVTVNLKPNGDE 2769
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 31.9 bits (69), Expect = 0.26
Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 1/133 (0%)
Frame = +3
Query: 18 EWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRF 197
+W L+ E +P+ LFE A + + P L ++ +GR + + L G
Sbjct: 2643 QWNVLVGTE--SPLDQLFEKAPYGEF--YVPKIGNGAPMRLAAYRTVGRIMGICLSQGDI 2698
Query: 198 IYSGFTMPFYKRMLNKKLTMKDIESIDPEFYNSLVWIKDNNIDECGLEMWFS-VDFEVLG 374
F+ + +L + D+ DP +N+L + + E L+ FS V+ G
Sbjct: 2699 FPLRFSRHIFSYILKLPICWLDLGFYDPVLFNNLRALFKAHPSE--LDTDFSIVEQSADG 2756
Query: 375 QVIHHELKPAGDK 413
+ + LKP GD+
Sbjct: 2757 KAVTVNLKPNGDE 2769
>AF047665-3|AAC04456.3| 566|Caenorhabditis elegans Hypothetical
protein T23E1.1 protein.
Length = 566
Score = 28.7 bits (61), Expect = 2.4
Identities = 15/63 (23%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Frame = +3
Query: 210 FTMPFYKRMLNKKLTM--KDIESIDP----EFYNSLVWIKDNNIDECGLEMWFSVDFEVL 371
F + F+ ++ N ++ ++ ES++P +F+N + ++D N + C M S++ ++L
Sbjct: 15 FCIGFWIQISNYRVRAHRREFESVEPFNNFKFFNEIGQVEDENENSCYPYMVHSIEADIL 74
Query: 372 GQV 380
G +
Sbjct: 75 GLI 77
>U39472-10|AAZ82853.1| 354|Caenorhabditis elegans Serpentine
receptor, class a (alpha)protein 36 protein.
Length = 354
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/27 (33%), Positives = 22/27 (81%)
Frame = -1
Query: 322 ILLSFIQTNEL*NSGSIDSMSFIVSFL 242
++++F+ ++L NSG+++ M+FI+S +
Sbjct: 137 LIVTFLPNSDLINSGTLNIMTFIMSVI 163
>AC024881-5|AAK71415.1| 668|Caenorhabditis elegans Na/ca exchangers
protein 10 protein.
Length = 668
Score = 26.6 bits (56), Expect = 9.7
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +3
Query: 225 YKRMLNKKLTMKDIESIDPEFYNSLVWIKD 314
YK L D+E I P+ + S W++D
Sbjct: 351 YKSYDEASLAFTDVEEIQPKTWKSWEWVRD 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,249,133
Number of Sequences: 27780
Number of extensions: 228787
Number of successful extensions: 632
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 626
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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